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首页> 外文期刊>International journal of molecular medicine >Downregulation of miR-145-5p in cancer cells and their derived exosomes may contribute to the development of ovarian cancer by targeting CT
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Downregulation of miR-145-5p in cancer cells and their derived exosomes may contribute to the development of ovarian cancer by targeting CT

机译:癌细胞中miR-145-5p的下调及其衍生的外泌体可通过靶向CT促进卵巢癌的发展

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The present study aimed to identify shared microRNAs (miRNAs) in ovarian cancer (OC) cells and their exosomes using microarray data (accession number GSE103708) available from the Gene Expression Omnibus database, including exosomal samples from 13 OC cell lines and 3 normal ovarian surface epithelial cell lines, and their original cell samples. Differentially expressed miRNAs (DE-miRNAs) were identified using the Linear Models for Microarray data method, and mRNA targets of DE-miRNAs were predicted using the miRWalk2 database. The potential functions of target genes were analyzed using Database for Annotation, Visualization and Integrated Discovery and intersected with known OC-associated pathways downloaded from the Comparative Toxicogenomics Database. The associations between crucial miRNAs and target genes, and their clinical associations, were validated using data from The Cancer Genome Atlas. As a result, 16 upregulated and 6 downregulated DE-miRNAs were shared in OC cell lines and their exosomes compared with normal controls. The target genes of 11 common DE-miRNAs were predicted. Among these DE-miRNAs, a low expression of homosapiens (hsa)-miR-145-5p was significantly correlated with a poor prognosis and higher stages. Although 91 target genes were predicted for hsa-miR-145-5p, only 4 genes [connective tissue growth factor (CTGF), myotubularin-related protein 14, protein phosphatase 3 catalytic subunit alpha and suppressor of cytokine signaling 7] were suggested as risk factors for prognosis. The subsequent Pearson's correlation analysis validated a significant negative correlation between hsa-miR-145-5p and CTGF (r=-0.1126, P=0.02188). According to the results of the functional analysis, CTGF is involved in the Hippo signaling pathway (hsa04390). In conclusion, decreased expression of hsa-miR-145 in OC and OC-derived exosomes may be a crucial biomarker for the diagnosis and treatment of OC.
机译:本研究旨在使用从基因表达综合体数据库获得的微阵列数据(登录号GSE103708)鉴定卵巢癌(OC)细胞及其外泌体中的共享MicroRNAS(miRNA),包括来自13个OC细胞系和3个正常卵巢表面的外泌体样品上皮细胞系,及其原始细胞样品。使用微阵列数据方法的线性模型来识别差异表达的miRNA(de-miRNA),并且使用MiRWalk2数据库预测De-MiRNA的mRNA目标。使用数据库分析靶基因的潜在功能,用于注释,可视化和整合发现,并与从比较毒物组科数据库下载的已知的OC相关路径相交。使用来自癌症基因组地图集的数据验证了关键miRNA和靶基因的关联及其临床关联。结果,与正常对照相比,在OC细胞系及其外泌体中分享16个上调和6个下调的脱麦仑。预测了11个常见的脱麦族的靶基因。在这些de-miRNA中,Homosapiens(HSA)-MIR-145-5P的低表达与预后和更高阶段显着相关。尽管预测了HSA-miR-145-5P的91个靶基因,但仅提出了4个基因[结缔组织生长因子(CTGF),肌瘤相关蛋白质3,蛋白质磷酸酶3催化亚基α和抑制细胞因子信号传导7]的抑制预后的因素。随后的Pearson的相关性分析验证了HSA-MIR-145-5P和CTGF(R = -0.1126,P = 0.02188)之间的显着的负相关。根据功能分析的结果,CTGF涉及河马信号通路(HSA04390)。总之,在OC和OC衍生的外泌体中的HSA-miR-145的表达降低可能是癌症诊断和治疗的重要生物标志物。

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