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Integration of transcriptomics, proteomics and metabolomics identifies biomarkers for pulmonary injury by polyhexamethylene guanidine phosphate (PHMG-p), a humidifier disinfectant, in rats

机译:转录组织,蛋白质组学和代谢组学的整合鉴定了通过聚环亚甲基胍磷酸盐(pHMG-P),加湿器消毒剂,大鼠肺损伤的生物标志物

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Polyhexamethylene guanidine phosphate (PHMG-p) was used as a humidifier disinfectant in Korea. PHMG induced severe pulmonary fibrosis in Koreans. The objective of this study was to elucidate mechanism of pulmonary toxicity caused by PHMG-p in rats using multi-omics analysis. Wistar rats were intratracheally instilled with PHMG-p by single (1.5 mg/kg) administration or 4-week (0.1 mg/kg, 2 times/week) repeated administration. Histopathologic examination was performed with hematoxylin and eosin staining. Alveolar macrophage aggregation and granulomatous inflammation were observed in rats treated with single dose of PHMG-p. Pulmonary fibrosis, chronic inflammation, bronchiol-alveolar fibrosis, and metaplasia of squamous cell were observed in repeated dose group. Next generation sequencing (NGS) was performed for transcriptome profiling after mRNA isolation from bronchiol-alveoli. Bronchiol-alveoli proteomic profiling was performed using an Orbitrap Q-exactive mass spectrometer. Serum and urinary metabolites were determined using H-1-NMR. Among 418 differentially expressed genes (DEGs) and 67 differentially expressed proteins (DEPs), changes of 16 mRNA levels were significantly correlated with changes of their protein levels in both single and repeated dose groups. Remarkable biological processes represented by both DEGs and DEPs were defense response, inflammatory response, response to stress, and immune response. Arginase 1 (Arg1) and lipocalin 2 (Lcn2) were identified to be major regulators for PHMG-p-induced pulmonary toxicity based on merged analysis using DEGs and DEPs. In metabolomics study, 52 metabolites (VIP > 0.5) were determined in serum and urine of single and repeated-dose groups. Glutamate and choline were selected as major metabolites. They were found to be major factors affecting inflammatory response in association with DEGs and DEPs. Arg1 and Lcn2 were suggested to be major gene and protein related to pulmonary damage by PHMG-p while serum or urinary glutamate and choline were endogenous metabolites related to pulmonary damage by PHMG-p.
机译:将聚环亚甲基胍磷酸盐(PHMG-P)用作韩国的加湿器消毒剂。 PHMG在韩国人诱导严重的肺纤维化。本研究的目的是使用多OMICS分析阐明由大鼠PHMG-P引起的肺毒性的机制。用单一(1.5mg / kg)给药或4周(0.1mg / kg,2次/周)重复给药,用pHMG-p肿瘤滴注腹腔炎大鼠。组织病理学检查用苏木精和曙红染色进行。在用单剂量pHMG-p处理的大鼠中观察到肺泡巨噬细胞聚集和肉芽肿炎症。在反复剂量组中观察到肺纤维化,慢性炎症,支气管 - 肺泡纤维化和鳞状细胞的细胞癌。在从支气管 - 肺泡的MRNA分离后对转录组分析进行下一代测序(NGS)。使用嵌合Q-辐射质谱仪进行支气管 - 肺泡蛋白质组学分析。使用H-1-NMR测定血清和尿代谢物。在418个差异表达的基因(DEGS)和67个差异表达蛋白质(DEPS)中,16 mRNA水平的变化与单一和重复剂量组中的蛋白质水平的变化显着相关。由DEG和DEPS表示的非凡的生物过程是防御反应,炎症反应,对应激的反应和免疫应答。将氨基酶1(ARC1)和脂素素2(LCN2)鉴定为基于使用DEPS的合并分析的PHMG-P诱导的肺毒性的主要调节剂。在代谢组科中,在单一和重复剂量基团的血清和尿液中测定52代谢物(VIP> 0.5)。选择谷氨酸和胆碱作为主要代谢物。他们被发现是影响与DEGS相关联的炎症反应的主要因素。 ARG1和LCN2被建议是通过PHMG-P与肺损伤有关的主要基因和蛋白质,而血清或泌尿谷氨酸和胆碱是通过PHMG-P与肺损伤有关的内源代谢物。

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