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首页> 外文期刊>Archives of Insect Biochemistry and Physiology >Antennal transcriptome analysis of the maize weevil Sitophilus zeamais: Identification and tissue expression profiling of candidate odorant-binding protein genes
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Antennal transcriptome analysis of the maize weevil Sitophilus zeamais: Identification and tissue expression profiling of candidate odorant-binding protein genes

机译:玉米叶梨杆菌的抗脑转录组分析Zeamais:候选气味结合蛋白基因的鉴定和组织表达分析

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Our bioassays reviewed that antennae played crucial roles in the responses of maize weevil (Sitophilus zeamais) to food and sex volatiles. In order to identify the maize weevil odorant-binding protein (OBP) genes, we analyzed its antennal transcriptome. In total, 21,587,928 high-quality clean reads were obtained from RNA-seq, 52,206 unigenes were assembled, and 25,744 unigenes showed significant similarity (E value 10(-5)) to known proteins in the NCBI nonredundant protein database. From those unigenes, we identified 41 candidate OBP proteins, which could be categorized into dimeric OBPs subfamily, minus-C OBPs subfamily, and classical OBPs subfamily. Phylogenic analysis indicated that most maize weevil OBPs were closely related to their orthologues in other beetles of the Superfamily Curculionoidea. We further investigated the expression profiles of those candidate OBP genes by quantitative real-time polymerase chain reaction. Twenty-six of forty-one maize weevil OBP genes were highly expressed in the antennae or other parts of the head. The rest were expressed in the legs, wings, or other tested tissues. The antennal transcriptomic data and candidate OBP genes described here provide a basis for the functional studies of the maize weevil chemical perception, which are potential novel targets for pest control strategies.
机译:我们的生物测量评例审查了天线在玉米象鼻虫(SITOPHILUSZEAMAIS)对食品和性挥发物的反应中起着至关重要的作用。为了鉴定玉米象鼻虫含有气味结合蛋白(OBP)基因,我们分析了其肿瘤转录组。总共可以从RNA-SEQ获得21,587,928个高质量的清洁读数,组装了52,206个unigenes,并且25,744个unigenes在NCBI NORED蛋白数据库中的已知蛋白质显示出显着的相似性(E值<10(-5))。从那些unigenes来看,我们确定了41个候选OBP蛋白,可以将其分为二聚体obps子家族,减去-c obps子类和古典obps子类。系统发育分析表明,大多数玉米象鼻虫患者与其在超家族植物的其他甲虫中的原始性密切相关。我们进一步通过定量实时聚合酶链反应研究了这些候选OBP基因的表达谱。在触角或头部的其他部位高度表达二十六种玉米致鼠标GEP基因。其余的是在腿,翅膀或其他测试组织中表达。这里描述的抗脑转录组和候选OBP基因为玉米象鼻虫化学感知的功能研究提供了基础,这是潜在的害虫控制策略的新靶点。

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