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Antimicrobial susceptibility of Bacteroides fragilis group organisms in Hong Kong by the tentative EUCAST disc diffusion method

机译:临时果蝇圆盘扩散法,香港菌株脆弱群体生物的抗菌剂易感性

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摘要

Abstract This study used a recently developed EUCAST disc diffusion method to measure the susceptibility of 741 B.?fragilis group isolates to six antibiotics. Isolates nonsusceptible to imipenem and metronidazole by the disc method were further investigated by E-test. Species identification was obtained by matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS), PCR assays and 16S rRNA sequencing. The most common species were B.?fragilis (n?=?424, including 81 division II and 343 division I isolates), B.?thetaiotaomicron (n?=?111), B.?ovatus (n?=?53) and B.?vulgatus (n?=?46). Overall, metronidazole following by imipenem and amoxicillin-clavulanate are the most active agents with over 90% of all the isolates being susceptible at the tentative disc breakpoints. Susceptibility rates for moxifloxacin (69.5%), piperacillin-tazobactam (58.2%) and clindamycin (37.2%) were much lower. Metronidazole is the only agent active against >90% of B.?fragilis , non- fragilis Bacteroides and Parabacteroides isolates. With the exception of B.?fragilis division II, imipenem was active against 88.0%–98.3% of isolates of the other species. Susceptibility rates for clindamycin (14.4%–54.3%) and moxifloxacin (33.3%–80.6%) were low across all species and many isolates had no inhibition zone around the discs. E-test testing confirmed 8.2% (61/741) and 1.6% (12/741) isolates as nonsusceptible to imipenem and metronidazole, respectively with B.?fragilis and B.?thetaoiotaomicron accounting for a large share of the observed resistance to both agents. Two imipenem-resistant and one metronidazole-resistant B.?dorei were misidentified as B.?vulgatus by MALDI-TOF MS. These data highlights the importance anaerobic susceptibility testing in clinical laboratories to guide therapy. Highlights ? Resistance of Bacteroides fragilis group bacteria is linked to outcome. ? Antimicrobial susceptibilities of 741 B.?fragilis group bacteria were assessed. ? Metronidazole is the only agent active against >90% of B.?fragilis , non- fragilis Bacteroides and Parabacteroides isolates. ? Except for B.?fragilis division II, imipenem was active against 88.0%–98.3% of the other subgroups. ? Susceptibility rates for clindamycin and moxifloxacin were low for many species within B.?fragilis group.
机译:摘要本研究使用最近开发的肉糖圆盘扩散方法来测量741 B.?FRagilis组分离株至六种抗生素的敏感性。通过电子试验进一步研究了通过椎间盘法测定Imipenem和甲硝唑的分离物。物种鉴定通过基质辅助激光解吸电离 - 飞行时间质谱(MALDI-TOF MS),PCR测定和16S rRNA测序来获得。最常见的物种是B.?Fragilis(n?=Δ224,包括81段II和343司I分离),B。?近因达测世(N?=?111),B.?ovatus(n?=?53)和B.?Vulgatus(n?= 46)。总体而言,甲嘧唑和阿莫西林 - 克拉维酸酯的甲硝唑是最活性的药剂,其中90%以上所有隔离物在暂定盘断点易感。 Moxifloxacin(69.5%),Piperacillin-Tazobactam(58.2%)和Clindamycin(37.2%)的易感性要低得多。甲硝唑是唯一反对> 90%的B.?Fragilis,非脆弱菌株和偶模分离物的药剂。除了B.?Fragilis段II外,Imipenem患有88.0%-98.3%的其他物种的活性。克林霉素的易感性率(14.4%-54.3%)和莫西沙星(33.3%-80.6%)在所有物种上均低,并且许多分离物在盘周围没有抑制区。 E-Tes​​t测试确认了8.2%(61/741)和1.6%(12/741)分离为iniipenem和甲硝唑的无味,与B.?Fragilis和B.?thetaoiotaomicron核算占观察到的耐两种抗性代理商。通过MALDI-TOF MS被耐两种抗药性和抗甲硝唑抗性B.?dorei被误识别为B.?Vulgatus。这些数据突出了临床实验室中的重要性厌氧易感性测试来指导治疗。强调 ?将菌体脆弱组细菌的抗性与结果相关联。还评估了741 B.?FRagilis组细菌的抗菌剂敏感性。还甲硝唑是唯一反对> 90%的B.?Fragilis,非脆弱菌株和偶模分离物的药剂。还除B.?FRagilis Division II外,Imipenem患有其他亚组的88.0%-98.3%。还在B.?Fragilis组内的许多物种中,克林霉素和莫西霉素的易感性率较低。

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