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首页> 外文期刊>ACS catalysis >Mechanism of Sulfoxidation and C-S Bond Formation Involved in the Biosynthesis of Ergothioneine Catalyzed by Ergothioneine Synthase (EgtB)
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Mechanism of Sulfoxidation and C-S Bond Formation Involved in the Biosynthesis of Ergothioneine Catalyzed by Ergothioneine Synthase (EgtB)

机译:中硫甲酸盐合成酶(EGTB)催化的亚硫柳胺生物合成的亚磺氧化和C-S键形成的机理

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摘要

Ergothioneine synthase (EgtB) is a unique non-heme mononuclear iron enzyme that catalyzes the sulfoxidation and C-S bond formation between gamma-glutamyl cysteine (gamma GC) and N-alpha-trimethyl histidine (TMH) as a pivotal step in the ergothioneine biosynthesis. A controversy has arisen regarding the sequence of sulfoxidation and C-S bond formation in the catalytic cycle. To clarify this issue, the QM/MM approach has been employed to investigate the detailed mechanism of EgtB. Two binding modes of O-2 to Fe(II) ("end-on" and "side-on") have been identified. Within the present computational model, the end-on binding mode of O-2 is preferred. The open-shell singlet is calculated to be the ground state, whereas the quintet is the most active state. Moreover, the sulfoxidation is prior to the formation of the C-S bond, and the reaction mainly occurs on the quintet state surface. Due to the electron transfer from the gamma GC to the ferric superoxide, the sulfur atom of gamma GC has partial radical characteristics, which facilitates the attack of the distal oxygen atom on the sulfur radical of gamma GC to form the sulfoxide. The formation of TMH C2 anion, i.e., the abstraction of the proton from the imidazole group in TMH by the Fe(IV)-oxo species, is the prerequisite for C-S bond formation, which is the rate-limiting step with an energy barrier of 21.7 kcal/mol. In addition, it is also found that although the resulting iron(III)-oxo can easily abstract a proton from Tyr377 to generate a phenolic hydroxyl anion, the subsequent proton transfer from C2 to Tyr377 is calculated to be difficu thus, Tyr377 is not directly involved in the sulfoxidation and C-S bond formation. Our calculations also reveal that the side-on mode is not the catalytically relevant species. This work provides a direct comparison with previous experimental and theoretical studies, which is helpful for understanding the catalysis of ergothioneine synthase and related enzymes.
机译:浆硫脲素合酶(EGTB)是一种独特的非血红素单核铁酶,其催化γ-谷氨酸氨基半胱氨酸(Gamma GC)和N-α-三甲基组氨酸(TMH)之间的亚磺氧化和C-S键形成,作为替代硫柳肝生物合成中的枢轴步骤。关于催化循环中的亚磺氧化和C-S键形成的序列已经出现了争议。为了澄清这个问题,已经采用了QM / MM方法来研究EGTB的详细机制。已经鉴定了两种O-2至Fe(II)的结合模式(“开启”和“侧面”)。在本计算模型中,优选O-2的结束绑定模式。计算开关单线件以接地状态计算,而Quintet是最活跃的状态。此外,亚磺氧化是在形成C-S键之前,并且反应主要发生在Quintet状态表面上。由于从γGC转移到铁超氧化物,γGC的硫原子具有部分自由基特征,这有利于远端氧原子对γGC的硫基团形成亚砜的侵蚀。 TMH C2阴离子的形成,即Fe(IV)-OxO物种中TMH中的咪唑基的质子的提取,是Cs键形成的先决条件,这是具有能量屏障的速率限制步骤21.7 kcal / mol。此外,还发现所得铁(III) - 过氧可以容易地摘要来自Tyr377的质子,以产生酚醛羟基阴离子,因此计算从C2到Tyr377的后续质子转移才能困难;因此,Tyr377不直接参与亚磺氧化和C-S键形成。我们的计算还表明,侧面模式不是催化相关的物种。这项工作与先前的实验和理论研究提供了直接的比较,这有助于了解替代硫柳胺合酶和相关酶的催化。

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