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A Random Forest-Induced Distance-Based Measure of Physiologic al Dysregulation

机译:一种随机森林诱导的基于距离的生理学Al失呼测量

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Background: Aging involves gradual, multisystemic Physiological Dysregulation (PD) which increases risk of age-related comorbidities. Ability to quantify age-related PD could provide insights into biological mechanisms underlying the aging process. One approach to measuring PD exploitsthe fact that increasing PD manifests as a gradual deviation of physiological parameters away from normal levels. A recent geometric approach for quantifying PD uses Mahalanobis distance to measure the extent to which an individual's physiological parameters (measured via biomarkers fromclinical blood biochemistry panels) deviate from normal levels. While useful, this approach has shortcomings that may impact its accuracy, primarily the incorrect assumption of multivariate normality among biomarkers, and identical weighting of biomarkers. Herein, we develop a more robustmultivariate distance-based measure of PD. Method: Proximity matrices induced by survival tree ensembles (Random Survival Forests) were used to compute a robust distance metric for quantifying how abnormal an individual's biomarker profile is. This approach requires no distributionalassumptions and allows differential weighting of biomarkers based on association with mortality. Using receiver operating characteristic analysis and model fit statistics we compared performance of our measure to the standard approach based on Mahalanobis distance. Results & Conclusion:Our new metric showed statistically significant improvements in predicting mortality, health status and biological age, compared to the standard approach. Additional advantages offered by our method are the ability to handle missing values in biomarkers and to accommodate categorical riskfactors. These results suggest our approach could provide greater precision in the evaluation of PD, which could enable better characterization of the extent and impact of degenerative processes resulting from aging.
机译:背景:衰老涉及逐渐,多系统生理失调(PD),从而提高年龄相关的合并症的风险。量化与年龄相关的PD的能力可以为老化过程的基础制定的生物机制提供见解。测量PD利用的一种方法,即增加PD作为远离正常水平的生理参数的逐渐偏差。最近用于量化PD的几何方法使用Mahalanobis距离来测量个体的生理参数(通过生物标志物从血液生物化学区测量)偏离正常水平的程度。虽然有用,但这种方法具有可能影响其准确性的缺点,主要是生物标志物之间多元正常性的错误假设,以及生物标志物的相同加权。在此,我们开发了一种基于距离的PD的距离基于距离的距离。方法:通过存活树集合(随机生存林)引起的接近矩阵来计算稳健的距离度量,以量化单个生物标志物轮廓的异常。该方法不需要分布assaSuctions,并且允许基于与死亡率相关的生物标志物的差异加权。使用接收器操作特性分析和模型拟合统计,我们将我们的措施与基于Mahalanobis距离的标准方法进行了比较。结果与结论:与标准方法相比,我们的新公制显示预测死亡率,健康状况和生物学年龄的统计显着改善。我们的方法提供的其他优点是能够处理生物标志物中缺失的值,并适应分类危险因素。这些结果表明我们的方法可以在PD的评估中提供更高的精确度,这可以更好地表征老化引起的退行过程的程度和影响。

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