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Development and evaluation of a self-propelled electric platform for high-throughput field phenotyping in wheat breeding trials

机译:小麦育种试验中高通量田间表型自推进电气平台的开发与评价

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摘要

The use of high-throughput phenotyping systems in crop research offers a powerful alternative to traditional methods for understanding plant behaviours. These systems provide a rapid, consistent, repeatable, non-destructive and objective sampling method to quantify complex and previously unobtainable traits at relatively fine resolutions. In this study, a field-based high-throughput phenotyping solution for wheat was developed using a sensor suite mounted on a self-propelled electric platform. A 2D LiDAR was used to scan wheat plots from overhead, while an odometry system was used as a local navigation system to determine the precise plot/plant/scan location. Accurate 3D models of the scanned wheat plots were reconstructed based on the recorded LiDAR and odometry data. Seven plots of different wheat cultivars were scanned to calculate the canopy height using LiDAR data, and these results were compared with manual ground truth measurements. Additionally, in each of these seven plots, the NDVI and PRI spectral indices were calculated using low-cost spectral reflectance sensors (SRSs) and an expensive visible/near-infrared (VIS/NIR) spectral analysis system used for reference purposes. The results of the validation showed good agreement between the LiDAR and manual wheat plant height measurements with an R-2 of 0.73 and RMSE = 2.63 cm for three days of campaign measurements. A statistically significant linear correlation was observed between the NOVI values obtained with the reference spectrometer and the low-cost SRS; the coefficients of determination were R-2 = 0.69 for day 1 and R-2 = 0.81 for day 2, suggesting a similar degree of accuracy among both sensing systems. The developed platform and the obtained wheat phenotyping results demonstrated the suitability of the system for acquiring reliable data under field conditions while maintaining a constant low speed and stability during field deployment. The adaptability of the platform to the structure of the crop and the repeatability of data collection throughout the growing season make the system suitable for integration into commercial breeding programmes.
机译:在作物研究中使用高吞吐量表型系统提供了一种强大的替代传统方法,以了解工厂行为。这些系统提供了一种快速,一致,可重复,无损性的和客观的采样方法,以在相对良好的分辨率下量化复杂和以前无法获得的特征。在该研究中,使用安装在自推进电平台上的传感器套件开发了一种用于小麦的基于现场的高通量表型溶液。 2D LIDAR用于扫描来自开销的小麦图,而OCOMORY系统被用作本地导航系统,以确定精确的绘图/植物/扫描位置。基于记录的激光雷达和内径数据,重建扫描小麦图的精确3D模型。扫描七个不同小麦品种的绘图以计算使用LIDAR数据的冠层高度,并将这些结果与手动地面真理测量进行了比较。另外,在这七个图中的每一个中,使用低成本光谱反射传感器(SRS)和用于参考目的的昂贵的可见/近红外(VI / NIR)光谱分析系统计算NDVI和PRI光谱索引。验证结果显示了激光雷达和手动小麦植物高度测量之间的良好一致性,R-2为0.73和RMSE = 2.63厘米,持续三天的竞选测量。在用参考光谱仪和低成本SR获得的Novi值之间观察到统计学上显着的线性相关性;第2天的第1天的测定系数为R-2 = 0.69,第2天= 0.81,暗示了感测系统之间的类似程度的精度。发达的平台和所获得的小麦表型结果表明系统在现场条件下获得可靠数据的适用性,同时在现场部署期间保持恒定的低速和稳定性。平台对作物结构的适应性以及整个生长季节的数据收集的可重复性使得系统适用于商业育种计划。

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