首页> 外文期刊>Biochimica et biophysica acta: BBA: International journal of biochemistry, biophysics and molecular biololgy. Proteins and Proteomics >Inhibitor and peptide binding to calmodulin characterized by high pressure Fourier transform infrared spectroscopy and Forster resonance energy transfer
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Inhibitor and peptide binding to calmodulin characterized by high pressure Fourier transform infrared spectroscopy and Forster resonance energy transfer

机译:抑制剂和肽与钙调蛋白的结合,其特征在于高压傅里叶变换红外光谱和福尔斯特共振能量转移

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摘要

We compare the binding of an inhibitor with that of a natural peptide to Ca2+ saturated calmodulin (holo-CaM). As inhibitor we have chosen trifluoperazine (TFP) that is inducing a huge conformational change of holo-CaM from the open dumbbell-shaped to the closed globular conformation upon binding. On the other hand, melittin is used as model peptide, which is a well-known natural binding partner of holo-CaM. The experiments are carried out as a function of pressure to reveal the contribution of volume or packing effects to the stability of the calmodulin-ligand complexes. From high-pressure Fourier transform infrared (FTIR) spectroscopy, we find that the holo-CaM/TFP complex has a much higher pressure stability than the holo-CaM/melittin complex. Although the analysis of the secondary structure of holo-CaM (without and with ligand) indicates no major changes up to several kbar, pressure-induced exposure of a-helices to water is most pronounced for halo-CaM without ligand, followed by holo-CaM/melittin and then holo-CaM/TFP. Moreover, structural pressure resistance of the holoCaM/TFP complex in comparison with the holo-CaM/melittin complex is also clearly visible by higher Ca2+ affinity. Forster resonance energy transfer (FRET) from the Tyr residues of holo-CaM to the Trp residue of melittin even suggests some partial dissociation of the complex under pressure which points to void volumes at the protein-ligand interface and to electrostatic binding. Thus, all results of this study show that the inhibitor TFP binds to holo-CaM with higher packing density than the peptide melittin enabling a favorable volume contribution to the inhibitor efficiency.
机译:我们将抑制剂与天然肽的结合进行比较至Ca2 +饱和钙调蛋白(Holo-Cam)。作为抑制剂,我们已经选择了三氟吡咯(TFP),其从开放的哑铃形状到封闭的球状构象时诱导Holo-Cab的巨大构象变化。另一方面,Melittin用作模型肽,其是Holo-Cam的众所周知的天然结合配偶体。实验是作为压力的函数进行的,以揭示体积或包装效应对钙调蛋白 - 配体复合物的稳定性的贡献。从高压傅里叶变换红外(FTIR)光谱,我们发现Holo-CAM / TFP复合物具有比Holo-Cam / Melittin复合物更高的压力稳定性。尽管对Holo-cam(没有和配体的二级结构的分析表明,没有几个KBAR的重大变化,对于没有配体的晕圈,对水的压力诱导的A型螺旋暴露最为明显,其次是Holo- CAM / MELITTIN然后HOLO-CAM / TFP。此外,通过更高的Ca2 +亲和力,HoloCam / TFP络合物与Holo-Cam / Melittin复合物相比的结构耐压性也明显可见。从Holo-cam的Tyr-Cam Tyr-Cabre的Tyr-Resefue的Forster共振能量转移(FRET)甚至表明在蛋白质 - 配体界面处的空隙体积和静电结合的压力下的一些部分解离。因此,该研究的所有结果表明,抑制剂TFP与填充密度更高的填充密度的Holo-CAM比肽熔融蛋白能够对抑制剂效率有利的贡献。

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