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ATR-FTIR and multivariate analysis as a screening tool for cervical cancer in women from northeast Brazil: a biospectroscopic approach

机译:ATR-FTIR和多变量分析作为巴西东北女性宫颈癌的筛查工具:一种生物光谱法

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摘要

Cervical cancer is the fourth most frequent cancer in women worldwide and the third in Brazil. Screening methods can substantially reduce new cases of cervical cancer by identifying pre-cancerous lesions, making it possible to offer correct management and treatment. For this purpose, this work reports the use of attenuated total reflection Fourier-transforminfrared (ATR-FTIR) spectroscopy coupled with principal component analysis (PCA) and variable selection techniques, such as successive projections algorithm (SPA) and genetic algorithm (GA) associated to linear or quadratic discriminant analysis (LDA/QDA), to classify samples for negative for intraepithelial lesion or malignancy (NILM), n = 43, and squamous intraepithelial lesion (SIL), n = 40, directly from blood plasma. Furthermore, the possibility to categorize SIL subclasses according to low-grade squamous intraepithelial lesion (LSIL) and high-grade squamous intraepithelial lesion (HSIL) lesion degrees was evaluated. Application of variable selection algorithms, especially GA, considerably improved the classifications by choosing spectral variables that reflect the chemical differences between a healthy and pre-cancerous plasma sample. This method was able to correctly classify NILM vs. SIL with sensitivity and specificity for both classes varying around 77% using LDA. With QDA, the results were enhanced to sensitivity around 90% and specificity of 83%. NILM vs. LSIL presented sensitivity and specificity ranging between 67-94% and 82-94%, respectively. In addition, NILM vs. HSIL were found to have sensitivity and specificity from 76-97% to 73-100%, respectively, where QDA substantially provided better classifications. These findings highlight the potentiality of ATR-FTIR spectroscopy combined with multivariate analysis as a screening tool for pre-cancerous cervical lesions, which could contribute to reduce cervical cancer incidence.
机译:宫颈癌是全世界女性和巴西第三次最常见的癌症。通过鉴定癌前病变,筛选方法可以大大减少新宫颈癌病例,使得可以提供正确的管理和治疗。为此,该工作报告了使用衰减的全反射傅里叶变换过度(ATR-FTIR)光谱与主成分分析(PCA)和可变选择技术,例如连续投影算法(SPA)和遗传算法(GA)相关联直接来自血浆的线性或二次判别分析(LDA / QDA),以对阴性上皮病变或恶性肿瘤的阴性(nilm),n = 43和鳞状上皮内皮病变(SIL),n = 40,直接从血浆分类。此外,评价根据低级鳞状上皮内病变(LSIL)和高级鳞状上皮病变(HSIL)病变度进行分类SIL亚类的可能性。可变选择算法的应用,特别是通过选择反映健康和癌前血浆样品之间的化学差异的光谱变量来显着改善了分类。该方法能够正确对尼尔姆与SIL进行分类,对使用LDA的两种类别的敏感性和特异性进行敏感性和特异性。使用QDA,结果增强至敏感性约90%,特异性为83%。 Nilm与LSIL呈现出敏感性和特异性,分别在67-94%和82-94%之间。此外,发现尼霉与HSIL分别具有76-97%至73-100%的敏感性和特异性,其中QDA大大提供了更好的分类。这些发现突出了ATR-FTIR光谱的潜力与多变量分析相结合作为预癌性颈椎病变的筛选工具,这可能有助于降低宫颈癌发病率。

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  • 来源
    《RSC Advances》 |2016年第102期|共8页
  • 作者单位

    Univ Fed Rio Grande do Norte Inst Chem Biol Chem &

    Chemometr BR-59072970 Natal RN Brazil;

    Univ Fed Rio Grande do Norte Inst Chem Biol Chem &

    Chemometr BR-59072970 Natal RN Brazil;

    Univ Fed Rio Grande do Norte Inst Chem Biol Chem &

    Chemometr BR-59072970 Natal RN Brazil;

    Univ Fed Rio Grande do Norte Hlth Sci Ctr BR-59010180 Natal RN Brazil;

    Univ Fed Rio Grande do Norte Hlth Sci Ctr BR-59010180 Natal RN Brazil;

    Univ Fed Rio Grande do Norte Inst Chem Biol Chem &

    Chemometr BR-59072970 Natal RN Brazil;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 化学;
  • 关键词

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