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首页> 外文期刊>Journal of Molecular Structure >Investigation of reactive and spectroscopic properties of oxobutanoic acid derivative: Combined spectroscopic, DFT, MD and docking study
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Investigation of reactive and spectroscopic properties of oxobutanoic acid derivative: Combined spectroscopic, DFT, MD and docking study

机译:氧脱酸甲酸衍生物的反应性和光谱性能研究:组合光谱,DFT,MD和对接研究

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The optimized geometry and wavenumbers of 4-[(4-acetylphenyl)amino]-2-methylidene-4-oxobutanoic acid (APAMOB) have been calculated by density functional theory (DFT) using Becke's three-parameters hybrid functional (B3LYP) with 6-311++G(d) (5D, 7F) basis set. The theoretically predicted vibrational wavenumbers were compared with the observed FT-IR and FT-Raman spectra. The NH stretching wavenumber is red shifted in the IR spectrum from the computed wavenumber, which indicates the weakening of the NH bond. The ring breathing mode of the para substituted phenyl ring is assigned at 836 cm(-1) experimentally and at 835 cm(-1) theoretically. Molecular electrostatic potential map has also been plotted for predicting the reactive sites in the molecule. Using natural bond orbitals analysis hyperconjugative interactions and second order stabilization energies are calculated. Nonlinear optical properties of the molecule are predicted. In order to determine molecule sites that could be sensitive towards electrophilic attacks we have calculated ALIE values and mapped them to electron density surface. In the same way we have also visualized Fukui functions, which helped us to further gain an insight into the local reactivity properties of title molecule. Bond dissociation energies (BDE) have been calculated in order to determine if autoxidation mechanism is possible, while the potential influence of hydrolysis was investigated to calculations of radial distribution functions (RDF) obtained after molecular dynamics (MD) simulations. Molecular docking study suggests that the title compound shows the inhibitory activity against 2-deoxy-d-gluconate 3-dehydrogenase. (C) 2017 Elsevier B.V. All rights reserved.
机译:通过密度泛函理论(DFT)使用BECKE的三参数混合官能(B3LYP)用6,通过密度泛函理论(DFT)计算了4 - [(4-乙酰苯基)氨基] -2-甲基-4-氧丁酸(APAMOB)的优化几何形状和波纹酸(APAMOB)。 -311 ++ g(d)(5d,7f)基础集。将理论上预测的振动波数与观察到的FT-IR和FT-拉曼光谱进行比较。 NH拉伸波数是从计算的波数的红外光谱中移位,这表明NH键的弱化。 PARA取代苯环的环呼吸模式在理论上实验和835cm(-1)的836cm(-1)分配。还绘制了分子静电潜在图谱以预测分子中的反应性位点。使用天然键轨道分析,计算超强性相互作用和二阶稳定能量。预测分子的非线性光学性质。为了确定可以对电子亲电攻击敏感的分子位点,我们已经计算了外壳值并将其映射到电子密度表面。以同样的方式,我们还具有可视化的福禄功能,这有助于我们进一步深入了解标题分子的局部反应性特性。已经计算了粘合解离能(BDE)以确定是否可以确定自动氧化机制,同时研究了水解的潜在影响,以计算分子动力学(MD)模拟后获得的径向分布函数(RDF)。分子对接研究表明标题化合物显示对2-脱氧-D-葡萄糖酸酯3-脱氢酶的抑制活性。 (c)2017年Elsevier B.V.保留所有权利。

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