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首页> 外文期刊>The journal of physical chemistry, C. Nanomaterials and interfaces >Refining Crystal Structures with Quadrupolar NMR and Dispersion-Corrected Density Functional Theory
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Refining Crystal Structures with Quadrupolar NMR and Dispersion-Corrected Density Functional Theory

机译:用四汞NMR和色散校正密度函数理论精炼晶体结构

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摘要

Nuclear electric field gradient (EFG) tensors obtained from solid-state NMR spectroscopy are highly responsive to variations in structural features. The orientations and principal components of EFG tensors show great variation between different molecular structures; hence, extraction of EFG tensor parameters, either experimentally or computationally, provides a powerful means for structure determination and refinement. Here, dispersion-corrected plane-wave density functional theory (DFT) is used to refine atomic coordinates in organic crystals determined initially through single-crystal Xray diffraction (XRD) or neutron diffraction methods. To accomplish this, an empirical parametrization of a two-body dispersion force field is illustrated, in which comparisons of experimental and calculated N-14, O-17, and Cl-35 EFG tensor parameters are used to assess the quality of energy-minimized structures. The parametrization is based on a training set of 17 organic solids. The analysis is applied subsequently to the structural refinements of structural models from over 60 different materials. For the prediction of Cl-35 EFG tensor parameters in particular, the optimization protocols described herein lead to a substantial improvement in agreement with experiment relative to structures obtained by XRD methods or by refinement with plane-wave DFT without the inclusion of the force field. The results further demonstrate that crystal structures with atomic coordinates refined with the present methods are able to pinpoint the positions of hydrogen atoms participating in H...Cl- hydrogen bonding with a higher degree of precision than is possible through neutron diffraction. This methodology, which is facile to implement within most DFT software packages, should prove to be very useful for future structural refinements using NMR crystallographic methods.
机译:从固态NMR光谱获得的核电场梯度(EFG)张量对结构特征的变化非常响应。 EFG张量的方向和主要成分在不同的分子结构之间显示出很大的变化;因此,在实验或计算上提取EFG张量参数,提供了用于结构确定和改进的强大手段。这里,使用色散校正的平面波密度泛函理论(DFT)来优化最初通过单晶X射线衍射(XRD)或中子衍射方法测定的有机晶体中的原子坐标。为了实现这一点,示出了双体色散力场的经验参数化,其中使用实验和计算的N-14,O-17和CL-35 EFG张量参数的比较来评估能量最小化的质量结构。参数化基于17个有机固体的训练组。该分析随后从60多种不同材料的结构模型的结构改进之后应用。为了特别是预测CL-35 EFG张量参数,这里描述的优化方案导致与通过XRD方法获得的结构的实验或通过用平面波DFT的改进而产生的实质性改善,而不包含力场。结果进一步表明,具有本方法精制的原子坐标的晶体结构能够针对参与H ... Cl-氢键合的氢原子的位置,其比通过中子衍射更高的精度。这种方法在大多数DFT软件包中实现的方法,应该证明对使用NMR晶体测定的未来结构改进非常有用。

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