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Solvent dynamics play a decisive role in the complex formation of biologically relevant redox proteins

机译:溶剂动力学在生物相关的氧化还原蛋白的复杂形成中发挥着决定性作用

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摘要

Electron transfer processes between proteins are vital in many biological systems. Yet, the role of the solvent in influencing these redox reactions remains largely unknown. In this study, terahertz-time domain spectroscopy (THz-TDS) is used to probe the collective hydration dynamics of flavoenzyme ferredoxin-NADP(+)-reductase (FNR), electron transfer protein ferredoxin-1 (PetF), and the transient complex that results from their interaction. Results reveal changes in the sub-picosecond hydration dynamics that are dependent upon the surface electrostatic properties of the individual proteins and the transient complex. Retarded solvent dynamics of 8-9 ps are observed for FNR, PetF, and the FNR:PetF transient complex. Binding of the FNR:PetF complex to the substrate NADP(+) results in bulk-like solvent dynamics of 7 ps, showing that formation of the ternary complex is entropically favored. Our THz measurements reveal that the electrostatic interaction of the protein surface with water results in charge sensitive changes in the solvent dynamics. Complex formation between the positively charged FNR:NADP(+) pre-complex and the negatively charged PetF is not only entropically favored, but in addition the solvent reorganization into more bulk-like water assists the molecular recognition process. The change in hydration dynamics observed here suggests that the interaction with the solvent plays a significant role in mediating electron transfer processes between proteins.
机译:蛋白质之间的电子转移过程在许多生物系统中至关重要。然而,溶剂在影响这些氧化还原反应中的作用仍然很大程度上是未知的。在该研究中,Terahertz-Time域光谱(THz-TDS)用于探测黄酮酶富勒沙昔林 - NADP(+) - 还原酶(FNR),电子转移蛋白福兰昔汀-1(PETF)的集体水合动力学,以及瞬态复合物这是他们的互动。结果揭示了依赖于各种蛋白质的表面静电性能和瞬态复合物的亚皮秒的水合动力学的变化。对于FNR,PETF和FNR:PETF瞬态复合物,观察到8-9 ps的延迟溶剂动力学。 FNR:PETF复合物与底物NADP(+)的结合导致7 PS的批量样溶剂动态,表明三元复合物的形成熵偏好。我们的THz测量表明,蛋白质表面与水的静电相互作用导致溶剂动力学的电荷敏感变化。在带正电荷的FNR:NADP(+)预络合物和带负电的PETF之间的复杂形成不仅熵偏好,而且还有溶剂重组进入更多的体状水,有助于分子识别过程。这里观察到的水合动力学的变化表明,与溶剂的相互作用在介导蛋白质之间的电子转移过程中起着重要作用。

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