GateFinder: projection-based gating strategy optimization for flow and mass cytometry

Aghaeepour Nima; Simonds Erin F.; Knapp David J. H. F.; Bruggner Robert V; Sachs Karen; Culos Anthony; Gherardini Pier Federico; Samusik Nikolay; Fragiadakis Gabriela K.; Bendall Sean C.; Gaudilliere Brice; Angst Martin S.; Eaves Connie J.; Weiss William A.; Fantl Wendy J.; Nolan Garry P.

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GateFinder: projection-based gating strategy optimization for flow and mass cytometry

机译：GateFinder：基于投影的流动和质量细胞测定策略优化

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Motivation: High-parameter single-cell technologies can reveal novel cell populations of interest, but studying or validating these populations using lower-parameter methods remains challenging.

机译：动机：高参数单细胞技术可以揭示利益的新细胞群，但使用较低参数方法研究或验证这些人群仍然具有挑战性。

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《Bioinformatics》 |2018年第23期|共3页
作者
Aghaeepour Nima; Simonds Erin F.; Knapp David J. H. F.; Bruggner Robert V; Sachs Karen; Culos Anthony; Gherardini Pier Federico; Samusik Nikolay; Fragiadakis Gabriela K.; Bendall Sean C.; Gaudilliere Brice; Angst Martin S.; Eaves Connie J.; Weiss William A.; Fantl Wendy J.; Nolan Garry P.;
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作者单位

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Univ Calif San Francisco Dept Neurol San Francisco CA USA;

British Columbia Canc Res Ctr Terry Fox Lab Vancouver BC Canada;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Dept Anesthesiol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

Stanford Univ Dept Anesthesiol Stanford CA 94305 USA;

British Columbia Canc Res Ctr Terry Fox Lab Vancouver BC Canada;

Univ Calif San Francisco Dept Neurol San Francisco CA USA;

Stanford Univ Dept Obstet &

Gynecol Stanford CA 94305 USA;

Stanford Univ Baxter Lab Stem Cell Biol Stanford CA 94305 USA;

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正文语种 eng
中图分类生物工程学（生物技术）;
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1. GateFinder: projection-based gating strategy optimization for flow and mass cytometry [J] . Aghaeepour Nima, Simonds Erin F., Knapp David J. H. F., Bioinformatics . 2018,第23期

机译：GateFinder：基于投影的流动和质量细胞测定策略优化
2. Optimization of a highly standardized carboxyfluorescein succinimidyl ester flow cytometry panel and gating strategy design using discriminative information measure evaluation [J] . Chan C., Lin L., Frelinger J., Cytometry, Part A: the journal of the International Society for Analytical Cytology . 2010,第12期

机译：高度标准化的羧基荧光素琥珀酰亚胺酯流式细胞仪面板的优化和使用区分性信息量度评估的门控策略设计
3. Human Blood Monocyte Subsets A New Gating Strategy Defined Using Cell Surface Markers Identified by Mass Cytometry [J] . Thomas Graham D., Hamers Anouk A. J., Nakao Catherine, Arteriosclerosis, thrombosis, and vascular biology . 2017,第8期

机译：人血单核细胞亚群使用由质量细胞仪鉴定的细胞表面标志物定义的新的门控策略
4. Integrated Parallel Flow Cytometry Device with Time Gated Spads [C] . Daiki Sato, Takahiro Shindo, Takeshi Mitsunaka, International Conference on Solid-State Sensors, Actuators and Microsystems & Eurosensors XXXIII . 2019

机译：带有时间门控间隔的集成并行流式细胞仪
5. Development of peptide targeted liposomes and in vitro assays for binding quantification and optimization under flow using microfluidics and flow cytometry [D] . Kusunose, Jiro 2013

机译：使用微流控和流式细胞仪开发靶向肽的脂质体并进行体外测定以进行结合定量和优化
6. Optimization of a highly standardized carboxyfluorescein succinimidyl ester flow cytometry panel and gating strategy design using Discriminative Information Measure Evaluation (DIME) [O] . Cliburn Chan, Lin Lin, Jacob Frelinger, -1

机译：优化高度标准化的羧基荧光素琥珀酰亚胺酯流式细胞术面板和使用鉴别信息措施评估（DIME）的门控策略设计
7. Optimization of a highly standardized carboxyfluorescein succinimidyl ester flow cytometry panel and gating strategy design using discriminative information measure evaluation [O] . Cliburn Chan, Lin Lin, Jacob Frelinger, 2010

机译：优化高度标准化的羧基荧光素琥珀酰亚胺酯流式细胞术面板和使用鉴别信息测量评估的门控策略设计

GateFinder: projection-based gating strategy optimization for flow and mass cytometry

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