首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Chloroperoxidase-Catalyzed Epoxidation of Cis-beta-Methylstyrene: NH-S Hydrogen Bonds and Proximal Helix Dipole Change the Catalytic Mechanism and Significantly Lower the Reaction Barrier
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Chloroperoxidase-Catalyzed Epoxidation of Cis-beta-Methylstyrene: NH-S Hydrogen Bonds and Proximal Helix Dipole Change the Catalytic Mechanism and Significantly Lower the Reaction Barrier

机译:氯过氧化物酶催化的顺式-β-甲基苯乙烯环氧化:NH-S氢键和近端螺旋偶极子改变催化机理并显着降低反应障碍

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Proximal hydrogen bonding of the axial sulfur with the backbone amides (NH-S) is a conserved feature of heme-thiolate enzymes such as chloroperoxidase (CPO) and cytochrome P450 (P450). In CPO, the effect of NH-S bonds is amplified by the dipole moment of the proximal helix. Our gas-phase DFT studies show that the proximal pocket effect significantly enhances CPO's reactivity toward the epoxidation of olefmic substrates. Comparison of models with and without proximal pocket residues shows that with them, the barrier for C-beta-O bond formation is lowered by about similar to 4.6 kcal/mol, while C-alpha-O-C-beta ring closure becomes barrierless. The dipole moment of the proximal helix was estimated to contribute 1/3 of the decrease, while the rest is attributed to the effect of NH-S bonds. The decrease of the reaction barrier correlates with increased electron density transfer to residues of the proximal pocket. The effect is most pronounced on the doublet spin surface and involves a change in the electron-transfer mechanism. A full enzyme QMMM study on the doublet spin surface gives about the same barrier as the gas-phase DFT study. The free-energy barrier was estimated to be in agreement with the experimental results for the CPO-catalyzed epoxidation of styrene.
机译:轴向硫与主链酰胺(NH-S)的近端氢键结合是血红素硫醇酯酶(如氯过氧化物酶(CPO)和细胞色素P450(P450))的保守特征。在CPO中,近端螺旋的偶极矩放大了NH-S键的作用。我们的气相DFT研究表明,近端袋效应显着增强了CPO对分子底物环氧化的反应性。具有和没有近端口袋残基的模型的比较表明,有了它们,C-β-O键形成的障碍降低了约4.6 kcal / mol,而C-α-O-C-β环闭合变得无障碍。据估计,近端螺旋的偶极矩贡献了减少的1/3,而其余部分则归因于NH-S键的作用。反应势垒的降低与电子密度转移至近端袋残余物的增加有关。该效应在双峰自旋表面上最明显,并且涉及电子转移机理的变化。在双峰自旋表面上进行的全酶QMMM研究与气相DFT研究具有相同的障碍。估计自由能垒与CPO催化的苯乙烯环氧化的实验结果一致。

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