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首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Novel Approach to Excited-State Calculations of Large Molecules Based on Divide-and-Conquer Method: Application to Photoactive Yellow Protein
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Novel Approach to Excited-State Calculations of Large Molecules Based on Divide-and-Conquer Method: Application to Photoactive Yellow Protein

机译:基于分治法的大分子激发态计算新方法:在光敏黄色蛋白中的应用

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摘要

In this study, the divide-and-conquer (DC) method is extended to configuration-interaction singles, time-dependent density functional, and symmetry-adapted cluster configuration interaction (SACCI) theories for enabling excited-state calculations of large systems. In DC-based excited-state theories, one subsystem is selected as the excitation subsystem and analyzed via excited-state calculations. Test calculations for formaldehyde in water and a conjugated aldehyde demonstrate the high accuracy and effectiveness of these methods. To demonstrate the efficiency of the method, we calculated the π→ π~* excited state of photoactive yellow protein (PYP). The numerical applications to PYP confirm that the DC-SACCI method significantly accelerates the excited-state calculations while maintaining high accuracy.
机译:在这项研究中,分治法(DC)扩展到配置交互单,时间依赖的密度泛函和对称适应的群集配置交互(SACCI)理论,以实现大型系统的激发态计算。在基于直流的激励状态理论中,选择一个子系统作为激励子系统,并通过激励状态计算对其进行分析。水和共轭醛中甲醛的测试计算证明了这些方法的高精度和有效性。为了证明该方法的有效性,我们计算了光敏黄色蛋白(PYP)的π→π〜*激发态。 PYP的数值应用证实了DC-SACCI方法在保持高精度的同时大大加快了激发态计算。

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