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首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >An Accurate Prediction of Hydration Free Energies by Combination of Molecular Integral Equations Theory with Structural Descriptors
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An Accurate Prediction of Hydration Free Energies by Combination of Molecular Integral Equations Theory with Structural Descriptors

机译:分子积分方程理论与结构描述符的组合准确预测水合自由能

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摘要

In this work, we report a novel method for the estimation of the hydration free energy of organic molecules, the structural descriptors correction (SDC) model. The method is based on a combination of the reference interaction site model (RISM) with several empirical corrections. The model requires only a small number of chemical descriptors associated with the main features of the chemical structure of solutes: excluded volume, branch, double bond, benzene ring, hydroxyl group, halogen atom, aldehyde group, ketone group, ether group, and phenol fragment. The optimum model was selected after testing of different RISM free energy expressions on a training set of 65 molecules. We show that the correction parameters of the SDC model are transferable between different chemical classes, which allows one to cover a wide range of organic solutes. The new model substantially increases the accuracy of calculated HFEs by RISM giving the standard deviation of the error for a test set of 120 organic molecules around 1.2 kcal/mol.
机译:在这项工作中,我们报告了一种用于估计有机分子水合自由能的新方法,即结构描述符校正(SDC)模型。该方法基于参考交互站点模型(RISM)与一些经验校正的组合。该模型仅需要少量与溶质化学结构的主要特征相关的化学描述符:排除体积,支链,双键,苯环,羟基,卤素原子,醛基,酮基,醚基和苯酚分段。在65个分子的训练集上测试了不同的RISM自由能表达后,选择了最佳模型。我们表明,SDC模型的校正参数在不同的化学类别之间是可转移的,从而可以覆盖各种有机溶质。新模型通过RISM显着提高了计算出的HFE的准确性,从而为120组有机分子在1.2 kcal / mol附近的误差提供了标准偏差。

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