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Condensed phase QM/MM simulations utilizing the exchange core functions to describe exchange repulsions at the QM boundary region

机译:利用交换核心功能的凝聚相QM / MM模拟来描述QM边界区域的交换排斥

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In a recent work, we developed a method [H. Takahashi et al., J. Chem. Phys. 143, 084104 (2015)] referred to as exchange-core function (ECF) approach, to compute exchange repulsion E-ex between solute and solvent in the framework of the quantum mechanical (QM)/molecular mechanical (MM) method. The ECF, represented with a Slater function, plays an essential role in determining Eex on the basis of the overlap model. In the work of Takahashi et al. [J. Chem. Phys. 143, 084104 (2015)], it was demonstrated that our approach is successful in computing the hydrogen bond energies of minimal QM/MM systems including a cationic QM solute. We provide in this paper the extension of the ECF approach to the free energy calculation in condensed phase QM/MM systems by combining the ECF and the QM/MM-ER approach [H. Takahashi et al., J. Chem. Phys. 121, 3989 (2004)]. By virtue of the theory of solutions in energy representation, the free energy contribution delta mu(ex) from the exchange repulsion was naturally formulated. We found that the ECF approach in combination with QM/MM-ER gives a substantial improvement on the calculation of the hydration free energy of a hydronium ion. This can be attributed to the fact that the ECF reasonably realizes the contraction of the electron density of the cation due to the deficit of an electron. Published by AIP Publishing.
机译:在最近的工作中,我们开发了一种方法[H. Takahashi等人,《化学杂志》物理143,084104(2015)]称为交换核心函数(ECF)方法,用于在量子力学(QM)/分子力学(MM)方法框架内计算溶质与溶剂之间的交换排斥力E-ex。以Slater函数表示的ECF在基于重叠模型确定Eex方面起着至关重要的作用。在高桥等人的工作中。 [J.化学物理143,084104(2015)],这证明了我们的方法成功地计算了包括阳离子QM溶质在内的最小QM / MM系统的氢键能。通过结合ECF和QM / MM-ER方法,我们在本文中提供了ECF方法在凝聚相QM / MM系统中自由能计算的扩展。 Takahashi等人,《化学杂志》物理121,3989(2004)]。借助能量表示中的解决方案理论,自然形成了来自交换排斥的自由能量贡献delta mu(ex)。我们发现,结合QM / MM-ER的ECF方法对水合氢离子的水合自由能的计算有很大的改进。这可以归因于以下事实:由于电子的缺乏,ECF合理地实现了阳离子电子密度的收缩。由AIP Publishing发布。

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