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Free energy landscape and molecular pathways of gas hydrate nucleation

机译:天然气水合物成核的自由能态势和分子途径

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Despite the significance of gas hydrates in diverse areas, a quantitative knowledge of hydrate formation at a molecular level is missing. The impediment to acquiring this understanding is primarily attributed to the stochastic nature and ultra-fine scales of nucleation events, posing a great challenge for both experiment and simulation to explore hydrate nucleation. Here we employ advanced molecular simulation methods, including forward flux sampling (FFS), p(B) histogram analysis, and backward flux sampling, to overcome the limit of direct molecular simulation for exploring both the free energy landscape and molecular pathways of hydrate nucleation. First we test the half-cage order parameter (H-COP) which we developed for driving FFS, through conducting the p(B) histogram analysis. Our results indeed show that H-COP describes well the reaction coordinates of hydrate nucleation. Through the verified order parameter, we then directly compute the free energy landscape for hydrate nucleation by combining both forward and backward flux sampling. The calculated stationary distribution density, which is obtained independently of nucleation theory, is found to fit well against the classical nucleation theory (CNT). Subsequent analysis of the obtained large ensemble of hydrate nucleation trajectories show that although on average, hydrate formation is facilitated by a two-step like mechanism involving a gradual transition from an amorphous to a crystalline structure, there also exist nucleation pathways where hydrate crystallizes directly, without going through the amorphous stage. The CNT-like free energy profile and the structural diversity suggest the existence of multiple active transition pathways for hydrate nucleation, and possibly also imply the near degeneracy in their free energy profiles among different pathways. Our results thus bring a new perspective to the long standing question of how hydrates crystallize. Published by AIP Publishing.
机译:尽管气体水合物在各个领域都具有重要意义,但仍缺乏在分子水平上水合物形成的定量知识。获得这种理解的障碍主要归因于成核事件的随机性质和超精细尺度,这对探索水合物成核的实验和模拟均构成了巨大挑战。在这里,我们采用先进的分子模拟方法,包括前向通量采样(FFS),p(B)直方图分析和后向通量采样,以克服直接分子模拟在探索自由能态势和水合物成核分子途径方面的局限性。首先,我们通过进行p(B)直方图分析来测试为驱动FFS而开发的半笼顺序参数(H-COP)。我们的结果确实表明,H-COP很好地描述了水合物成核的反应坐标。通过经过验证的阶数参数,我们可以通过结合前向和反向通量采样直接计算水合物成核的自由能态势。独立于成核理论而获得的计算出的静态分布密度被发现与经典成核理论(CNT)非常吻合。随后对获得的大量水合物成核轨迹的分析表明,尽管平均而言,水合物的形成是由两步类似的机制促进的,涉及从无定形到晶体结构的逐步过渡,但也存在水合物直接结晶的成核途径,而不经历无定形阶段。碳纳米管样的自由能谱和结构多样性表明存在水合物成核的多个活性过渡途径,并且可能还暗示了它们在不同途径之间的自由能谱接近简并性。因此,我们的结果为水合物如何结晶的长期存在的问题提供了新的视角。由AIP Publishing发布。

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