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首页> 外文期刊>The Journal of Chemical Physics >Composition dependent multiple structural transformations of myoglobin in aqueous ethanol solution: A combined experimental and theoretical study
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Composition dependent multiple structural transformations of myoglobin in aqueous ethanol solution: A combined experimental and theoretical study

机译:乙醇水溶液中肌红蛋白的成分依赖性多重结构转化:结合实验和理论研究

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Experimental studies (circular dichroism and ultra-violet (UV) absorption spectra) and large scale atomistic molecular dynamics simulations (accompanied by order parameter analyses) are combined to establish a number of remarkable (and unforeseen) structural transformations of protein myoglobin in aqueous ethanol mixture at various ethanol concentrations. The following results are particularly striking. (1) Two well-defined structural regimes, one at x(EtOH) similar to 0.05 and the other at x(EtOH) similar to 0.25, characterized by formation of distinct partially folded conformations and separated by a unique partially unfolded intermediate state at x(EtOH) similar to 0.15, are identified. (2) Existence of non-monotonic composition dependence of (i) radius of gyration, (ii) long range contact order, (iii) residue specific solvent accessible surface area of tryptophan, and (iv) circular dichroism spectra and UV-absorption peaks are observed. Interestingly at x(EtOH) similar to 0.15, time averaged value of the contact order parameter of the protein reaches a minimum, implying that this conformational state can be identified as a molten globule state. Multiple structural transformations well known in water-ethanol binary mixture appear to have considerably stronger effects on conformation and dynamics of the protein. We compare the present results with studies in water-dimethyl sulfoxide mixture where also distinct structural transformations are observed along with variation of co-solvent composition. (C) 2015 AIP Publishing LLC.
机译:结合实验研究(圆二色性和紫外线(UV)吸收光谱)和大规模原子分子动力学模拟(伴随有序参数分析),建立了乙醇水溶液中蛋白质肌红蛋白的许多显着(和不可预见的)结构转变在各种乙醇浓度下以下结果特别引人注目。 (1)两种结构明确的结构形式,一个在x(EtOH)处类似于0.05,另一个在x(EtOH)处类似于0.25,其特征在于形成不同的部分折叠的构象,并在x处被唯一的部分展开的中间状态隔开(EtOH)与0.15相似。 (2)(i)回转半径,(ii)远距离接触顺序,(iii)色氨酸的残基比溶剂可及表面积以及(iv)圆二色性光谱和UV吸收峰的非单调成分依赖性被观察。有趣的是,在x(EtOH)接近0.15时,蛋白质的接触顺序参数的时间平均值达到最小值,这意味着该构象状态可以识别为熔融小球状态。在水-乙醇二元混合物中众所周知的多种结构转变似乎对蛋白质的构象和动力学具有相当强的作用。我们将当前结果与水-二甲基亚砜混合物中的研究进行了比较,其中还观察到了明显的结构转变以及助溶剂组成的变化。 (C)2015 AIP Publishing LLC。

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