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Method of evaluating curvature-dependent elastic parameters for small unilamellar vesicles using molecular dynamics trajectory

机译:利用分子动力学轨迹评估单层小囊泡的曲率相关弹性参数的方法

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A numerical method is proposed for evaluating the curvature dependency of elastic parameters of a spherical vesicle based on a calculation of the pressure profile across the membrane. The proposed method is particularly useful for small unilamellar vesicles (SUVs), in which the internal structure of the membrane is asymmetric owing to the high curvature. In this case, the elastic energy is insufficiently described as a perturbation from a planar membrane. The calculated saddle-splay curvature modulus of SUVs, which is about 16 nm in diameter, is found to be much higher than that of a planar membrane. A comparison of the free energy change in the initial stage of vesicle-to-bicelle transformation with the Fromherz theory demonstrates that the elastic parameters estimated for SUVs provide better estimation of the free energy than those estimated for a planar membrane.
机译:提出了一种基于对跨膜压力分布的计算来评估球形囊泡弹性参数的曲率依赖性的数值方法。所提出的方法对于小的单层囊泡(SUVs)特别有用,其中由于高曲率,膜的内部结构不对称。在这种情况下,弹性能不足以描述为来自平面膜的扰动。发现所计算的SUV的鞍展曲曲率模量(直径约为16 nm)远高于平面膜。囊泡到二尖瓣转化初始阶段的自由能变化与Fromherz理论的比较表明,针对SUV估算的弹性参数比针对平面膜估算的弹性参数提供了更好的自由能估算。

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