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Cooperativity in the annealing of DNA origamis

机译:DNA Origamis退火中的协同作用

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DNA based nanostructures built on a long single stranded DNA scaffold, known as DNA origamis, offer the possibility to organize various molecules at the nanometer scale in one pot experiments. The folding of the scaffold is guaranteed by the presence of short, single stranded DNA sequences (staples), that hold together separate regions of the scaffold. In this paper, we modelize the annealing-melting properties of these DNA constructions. The model captures important features such as the hysteresis between melting and annealing, as well as the dependence upon the topology of the scaffold. We show that cooperativity between staples is critical to quantitatively explain the folding process of DNA origamis.
机译:在长单链DNA支架(称为DNA Origamis)上构建的基于DNA的纳米结构提供了在一次实验中以纳米级组织各种分子的可能性。支架的折叠通过短的单链DNA序列(钉)的存在来保证,这些序列将支架的各个区域固定在一起。在本文中,我们对这些DNA结构的退火融合特性进行了建模。该模型捕获了重要的特征,例如熔化和退火之间的磁滞以及对支架拓扑结构的依赖性。我们表明,订书钉之间的协作对于定量解释DNA Origamis的折叠过程至关重要。

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