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Solubilization of aromatic and hydrophobic moieties by arginine in aqueous solutions

机译:精氨酸在水溶液中增溶芳香族和疏水性部分

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Experiments hold intriguing, circumstantial clues to the mechanisms behind arginine-mediated solubilization of small organic drugs and suppression of protein aggregation driven by hydrophobic or aromatic associations, but how exactly arginine's molecular structure and interactions contribute to its function remains unclear since attention has focused so far on the thermodynamics of the preferential exclusion or binding of arginine. Here, we examine, through molecular dynamics simulations, how arginine solubilizes nanoscale particles with hydrophobic surfaces or aromatic-ring-type surface interactions. We show that preferential, hydrophobic, and dispersion interactions of arginine's guanidinium group with the particles lead to a surfactant-like behavior of arginine around the particles and to a solvation layer with a protective polar mask creating a hydrophilic shell. Additionally, arginine-arginine association around the solvation layer further prevents aggregative contacts. The results shed some light on the mechanistic basis of arginine's function as a suppressant of protein aggregation, although the complex energy landscapes and kinetic pathways of aggregation are protein-dependent and pose formidable challenges to developing comprehensive mechanistic pictures. Our results suggest arginine's mode of interaction with hydrophobic patches and aromatic residues could reduce aggregation-prone intermediate states of proteins and shield protein-protein aggregative contacts. The approach used here offers a systematic way of exploring implications of other amino acid/excipient interactions by studying interactions of the excipient with particles grafted with amino acids.
机译:关于精氨酸介导的小型有机药物增溶和疏水性或芳香族缔合驱动的蛋白质聚集抑制的机制,实验提供了有趣的环境线索,但是由于到目前为止,注意力一直集中在精氨酸的分子结构和相互作用上究竟如何发挥作用尚不清楚优先排除或结合精氨酸的热力学。在这里,我们通过分子动力学模拟研究了精氨酸如何溶解具有疏水性表面或芳香环型表面相互作用的纳米级颗粒。我们表明,精氨酸胍基与颗粒的优先,疏水和分散相互作用导致精氨酸在颗粒周围的表面活性剂样行为,并形成带有保护性极性罩的溶剂化层,从而形成亲水壳。另外,溶剂化层周围的精氨酸-精氨酸缔合进一步防止聚集接触。该结果为精氨酸作为蛋白质聚集抑制剂的机理奠定了基础,尽管复杂的能量构象和聚集的动力学途径是蛋白质依赖性的,并且对开发全面的机理图提出了严峻的挑战。我们的结果表明,精氨酸与疏水性斑块和芳香族残基的相互作用模式可以减少蛋白质易于聚集的中间状态并屏蔽蛋白质与蛋白质的聚集接触。通过研究赋形剂与嫁接于氨基酸的颗粒之间的相互作用,此处使用的方法提供了探索其他氨基酸/赋形剂相互作用含义的系统方法。

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