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Vibrational spectra from atomic fluctuations in dynamics simulations. II. Solvent-induced frequency fluctuations at femtosecond time resolution

机译:动力学模拟中来自原子波动的振动光谱。二。飞秒时间分辨率下溶剂引起的频率波动

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The midinfrared (MIR) spectra of molecules in polar solvents exhibit inhomogeneously broadened bands whose spectral positions are shifted as compared to the gas phase. The shifts are caused by interactions with structured solvation shells and the broadenings by fluctuations of these interactions. The MIR spectra can be calculated from hybrid molecular dynamics (MD) simulations, which treat the solute molecule by density functional theory and the solvent by molecular mechanics by the so-called instantaneous normal mode analysis (INMA) or by Fourier transforming the time correlation function (FTTCF) of the molecular dipole moment. In Paper I of this work [M. Schmitz and P. Tavan, J. Chem. Phys. 121, 12233 (2004)] we explored an alternative method based on generalized virial (GV) frequencies noting, however, that GV systematically underestimates frequencies. As shown by us these artifacts are caused by solvent-induced fluctuations of the (i) equilibrium geometry, (ii) force constants, and (iii) normal mode directions as well as by (iv) diagonal and (v) off-diagonal anharmonicities. Here we now show, by analyzing the time scales of fluctuations and sample MD trajectories of formaldehyde in the gas phase and in water, that all these sources of computational artifacts can be made visible by a Fourier analysis of the normal coordinates. Correspondingly, the error sources (i) and (iii)-(v) can be removed by bandpass filtering, as long as the spectral signatures of the respective effects are well separated from the fundamental band. Furthermore, the artifacts arising from effect (ii) can be strongly diminished by a time-resolved version of the GV approach (TF-GV). The TF-GV method then yields for each mode j a trajectory of the vibrational frequency omega(j)(tparallel totau) at a time resolution tau>tau(j), which is only limited by the corresponding oscillation time tau(j)=2pi/omega(j) and, thus, is in the femtosecond range. A correlation analysis of these trajectories clearly separates the librational motions from the conformational dynamics of the solvation shells and yields the inhomogeneously broadened MIR spectra, if the theory of motional narrowing is properly included. The MIR spectrum of formaldehyde in solution obtained by TF-GV agrees very well with the FTTCF result, if one applies the so-called "harmonic approximation" quantum correction factor and a temperature scaling to the FTTCF intensities. Also for INMA an excellent agreement is achieved if one disregards a slight INMA overestimate of linewidths. (C) 2004 American Institute of Physics.
机译:极性溶剂中分子的中红外(MIR)光谱显示出不均匀加宽的谱带,其光谱位置与气相相比发生了变化。这些变化是由于与结构化溶剂化壳的相互作用而引起的,并且是由于这些相互作用的波动而扩大的。 MIR光谱可通过混合分子动力学(MD)模拟计算得出,该模拟通过密度泛函理论处理溶质分子,通过分子力学通过所谓的瞬时正态分析(INMA)或通过傅立叶变换时间相关函数来处理溶剂(FTTCF)的分子偶极矩。在这项工作的论文一中[M. Schmitz和P.Tavan,J.Chem。物理121,12233(2004)],我们探索了一种基于广义病毒(GV)频率的替代方法,但要注意的是,GV系统地低估了频率。如我们所示,这些伪影是由(i)平衡几何形状,(ii)力常数和(iii)法向模式方向以及(iv)对角线和(v)非对角线非谐性的溶剂引起的波动引起的。现在,我们在这里显示,通过分析气相和水中甲醛的波动时间尺度和样品MD轨迹,可以通过对正态坐标进行傅立叶分析来使所有这些计算假象源均可见。相应地,误差源(i)和(iii)-(v)可以通过带通滤波去除,只要各个效应的频谱特征与基带良好分离即可。此外,可以通过时间分辨版本的GV方法(TF-GV)大大减少由效果(ii)引起的伪影。然后,TF-GV方法在时间分辨率为tau> tau(j)的情况下产生振动频率为ωmega(j)(tparallel totau)的每个模式ja轨迹,该时间分辨率仅受相应的振荡时间tau(j)= 2pi限制/ omega(j),因此在飞秒范围内。如果适当地包括了运动变窄的理论,则对这些轨迹的相关分析可以清楚地将自由运动与溶剂化壳的构象动力学区分开,并产生不均匀加宽的MIR谱。如果将所谓的“谐波近似”量子校正因子和温度标度应用于FTTCF强度,则通过TF-GV获得的溶液中甲醛的MIR光谱与FTTCF结果非常吻合。同样对于INMA,如果忽略了INMA对线宽的高估,也可以达成一个很好的协议。 (C)2004年美国物理研究所。

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