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Atomic scale fractal dimensionality in proteins

机译:蛋白质中的原子尺度分形维数

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The soft condensed matter of biological organisms exhibits atomic motions whose properties depend strongly on temperature and hydration conditions. Due to the superposition of rapidly fluctuating alternative motions at both very low temperatures (quantum effects) and very high temperatures (classical Brownian motion regime), the dimension of an atomic "path" is in reality different from unity. In the intermediate temperature regime and under environmental conditions which sustain active biological functions, the fractal dimension of the sets upon which atoms reside is an open question. Measured values of the fractal dimension of the sets on which the hydrogen atoms reside within the azurin protein macromolecule are reported. The distribution of proton positions was measured employing thermal neutron elastic scattering from azurin protein targets. As the temperature was raised from low to intermediate values, a previously known and biologically relevant dynamical transition was verified for the azurin protein only under hydrated conditions. The measured fractal exponent of the geometrical sets on which protons reside in the biologically relevant temperature regime is given by D=(0.65(+-)0.1). The relationship between fractal dimensionality and biological function is qualitatively discussed.
机译:生物有机体的软冷凝物表现出原子运动,其性质在很大程度上取决于温度和水合条件。由于在非常低的温度(量子效应)和非常高的温度(经典的布朗运动状态)下快速波动的交替运动的叠加,原子“路径”的尺寸实际上不同于单位。在维持活跃的生物学功能的中等温度范围和环境条件下,原子所驻留的集合的分形维数是一个悬而未决的问题。报告了氢原子驻留在天青蛋白大分子内的集合的分形维数的测量值。使用来自天青蛋白靶的热中子弹性散射测量质子位置的分布。随着温度从低值升高到中间值,仅在水合条件下验证了天青蛋白的先前已知且生物学相关的动力学转变。质子在生物学上相关的温度范围内所驻留的几何集合的分形指数的测量值由D =(0.65(+-)0.1)给出。定性地讨论了分形维数与生物学功能之间的关系。

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