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A theoretical study of the XP and NEXAFS spectra of alanine: gas phase molecule, crystal, and adsorbate at the ZnO(1010) surface

机译:丙氨酸的XP和NEXAFS光谱的理论研究:气相分子,晶体和ZnO(1010)表面的吸附物

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The adsorption of alanine on the mixed-terminated ZnO(1010) surface is studied by means of quantum-chemical ab initio calculations. Using a finite cluster model and the adsorption geometry as obtained both by periodic CPMD and embedded cluster calculations, the C1s, N1s and O1s X-ray photoelectron spectra (XPS) and near-edge X-ray absorption fine structure (NEXAFS) spectra are calculated for single alanine molecules on ZnO(1010). These spectra are compared with the spectra calculated for alanine in the gas phase and in its crystalline form and with experimental XPS and NEXAFS data for the isolated alanine molecule and for alanine adsorbed on ZnO(1010) at multilayer and monolayer coverage. The excellent agreement between the experimental and calculated XP and NEXAFS spectra confirms the calculated adsorption geometry: A single alanine molecule is bound to ZnO(1010) in a dissociated bidentate form with the two O atoms of the acid group bound to two Zn atoms of the surface and the proton transferred to one O atom of the surface. Other possible structures, such as adsorption of alanine in one of its neutral or zwitterionic forms in which the proton of the -COOH group remains at this group or is transferred to the amino group, can be excluded since they would give rise to quite different XP spectra. In the multilayer coverage regime, on the other hand, alanine is in its crystalline form as is also shown by the analysis of the XP spectra.
机译:通过量子化学从头算的方法研究了丙氨酸在混合终止的ZnO(1010)表面的吸附。使用有限簇模型和通过周期性CPMD和嵌入式簇计算获得的吸附几何结构,计算C1s,N1s和O1s X射线光电子能谱(XPS)和近边缘X射线吸收精细结构(NEXAFS)光谱用于ZnO(1010)上的单个丙氨酸分子。这些光谱与气相和结晶形式的丙氨酸计算的光谱以及分离的丙氨酸分子和多层和单层覆盖在ZnO(1010)上吸附的丙氨酸的实验XPS和NEXAFS数据进行了比较。 XP和NEXAFS光谱与实验光谱和计算光谱之间的极好的一致性证实了所计算的吸附几何形状:单个丙氨酸分子以解离的双齿形式与ZnO(1010)结合,而酸基的两个O原子与C的两个Zn原子结合。表面和质子转移到表面的一个O原子。可以排除其他可能的结构,例如以中性或两性离子形式之一吸附丙氨酸,其中-COOH基的质子保留在该基团上或转移到氨基上,因为它们会产生完全不同的XP光谱。另一方面,在多层覆盖方案中,丙氨酸为晶体形式,这也通过XP光谱分析显示。

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