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Novel zebrafish caspase-3 substrates.

机译:新型斑马鱼caspase-3底物。

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摘要

The zebrafish model has been widely used to investigate numerous signaling pathways in vertebrates, including programmed cell death. Although several zebrafish proteins homologous to mammalian caspases have been identified, our understanding of these zebrafish caspases is still limited. Recently, we identified a large number of natural caspase-3 substrates from the human proteome by using the mRNA-display selection method. Through comparative analysis, we found that the cleavage sites on some of these novel human caspase-3 substrates are highly conserved in their zebrafish orthologs. We report here the identification and characterization of 14 natural zebrafish caspase-3 substrates that have not yet been previously studied. The specific cleavage of these zebrafish proteins was compared with caspases from different species, and the protein fragments that contain the putative cleavage sites were mapped. The work described here could facilitate our understanding of the downstream signaling pathways that are mediated by caspase-3 in zebrafish.
机译:斑马鱼模型已被广泛用于研究脊椎动物中的许多信号传导途径,包括程序性细胞死亡。尽管已经鉴定了几种与哺乳动物胱天蛋白酶同源的斑马鱼蛋白,但我们对这些斑马鱼胱天蛋白酶的理解仍然有限。最近,我们通过使用mRNA展示选择方法从人蛋白质组中鉴定出大量天然caspase-3底物。通过比较分析,我们发现在这些新型人类caspase-3底物上的切割位点在其斑马鱼直系同源物中高度保守。我们在这里报告尚未鉴定过的14种天然斑马鱼caspase-3底物的鉴定和表征。将这些斑马鱼蛋白的特异性切割与来自不同物种的半胱天冬酶进行了比较,并绘制了包含推定切割位点的蛋白片段。这里描述的工作可以帮助我们理解由斑马鱼中的caspase-3介导的下游信号通路。

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