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Elucidation of Lipid Binding Sites on Lung Surfactant Protein A Using X-ray Crystallography, Mutagenesis, and Molecular Dynamics Simulations

机译:使用X射线晶体学,诱变和分子动力学模拟阐明肺表面活性剂蛋白A上的脂质结合位点

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摘要

Surfactant protein A (SP-A) is a collagenous C-type lectin (collectin) that is critical for pulmonary defense against inhaled microorganisms. Bifunctional avidity of SP-A for pathogen-associated molecular patterns (PAMPs) such as lipid A and for dipalmitoylphosphatidylcholine (DPPC), the major component of surfactant membranes lining the air liquid interface of the lung, ensures that the protein is poised for first-line interactions with inhaled pathogens. To improve our understanding of the motifs that are required for interactions with microbes and surfactant structures, we explored the role of the tyrosine-rich binding surface on the carbohydrate recognition domain of SP-A in the interaction with DPPC and lipid A using crystallography, site-directed mutagenesis, and molecular dynamics simulations. Critical binding features for DPPC binding include a three-walled tyrosine cage that binds the choline headgroup through cation-pi interactions and a positively charged cluster that binds the phosphoryl group. This basic cluster is also critical for binding of lipid A, a bacterial PAMP and target for SP-A. Molecular dynamics simulations further predict that SP-A binds lipid A more tightly than DPPC. These results suggest that the differential binding properties of SP-A favor transfer of the protein from surfactant DPPC to pathogen membranes containing appropriate lipid PAMPs to effect key host defense functions.
机译:表面活性剂蛋白A(SP-A)是一种C型胶原凝集素(collectin),对于肺部抵抗吸入微生物的防御至关重要。 SP-A对病原体相关分子模式(PAMP)(例如脂质A)和对二棕榈酰磷脂酰胆碱(DPPC)的双功能亲和力,确保肺气液界面上的表面活性剂膜的主要成分,可确保蛋白质首先用于与吸入的病原体的相互作用。为了提高我们对与微生物和表面活性剂结构相互作用所需的基序的理解,我们使用晶体学方法研究了SP-A碳水化合物识别结构域上富含酪氨酸的结合表面在与DPPC和脂质A相互作用中的作用。定向诱变和分子动力学模拟。 DPPC结合的关键结合特征包括通过阳离子-pi相互作用结合胆碱头基的三壁酪氨酸笼和结合磷酰基的带正电荷的簇。这个基本簇对于脂质A,细菌PAMP和SP-A靶标的结合也至关重要。分子动力学模拟进一步预测SP-A与DPPC的结合更紧密。这些结果表明,SP-A的不同结合特性有利于蛋白质从表面活性剂DPPC转移到含有适当脂质PAMP的病原体膜上,从而影响关键的宿主防御功能。

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