首页> 外文期刊>Biochemistry >Mutagenesis of a conserved glutamate reveals the contribution of electrostatic energy to adenosylcobalamin Co-C bond homolysis in ornithine 4,5-aminomutase and methylmalonyl-CoA mutase
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Mutagenesis of a conserved glutamate reveals the contribution of electrostatic energy to adenosylcobalamin Co-C bond homolysis in ornithine 4,5-aminomutase and methylmalonyl-CoA mutase

机译:保守谷氨酸的诱变揭示了在鸟氨酸4,5-氨基变位酶和甲基丙二酰-CoA变位酶中,静电能对腺苷钴胺素Co-C键均质化的贡献

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Binding of substrate to ornithine 4,5-aminomutase (OAM) and methylmalonyl-CoA mutase (MCM) leads to the formation of an electrostatic interaction between a conserved glutamate side chain and the adenosyl ribose of the adenosylcobalamin (AdoCbl) cofactor. The contribution of this residue (Glu338 in OAM from Clostridium sticklandii and Glu392 in human MCM) to AdoCbl Co-C bond labilization and catalysis was evaluated by substituting the residue with a glutamine, aspartate, or alanine. The OAM variants, E338Q, E338D, and E338A, showed 90-, 380-, and 670-fold reductions in catalytic turnover and 20-, 60-, and 220-fold reductions in k_(cat)/K_m, respectively. Likewise, the MCM variants, E392Q, E392D, and E392A, showed 16-, 330-, and 12-fold reductions in k_(cat), respectively. Binding of substrate to OAM is unaffected by the single-amino acid mutation as stopped-flow absorbance spectroscopy showed that the rates of external aldimine formation in the OAM variants were similar to that of the native enzyme. The decrease in the level of catalysis is instead linked to impaired Co-C bond rupture, as UV-visible spectroscopy did not show detectable AdoCbl homolysis upon binding of the physiological substrate, d-ornithine. AdoCbl homolysis was also not detected in the MCM mutants, as it was for the native enzyme. We conclude from these results that a gradual weakening of the electrostatic energy between the protein and the ribose leads to a progressive increase in the activation energy barrier for Co-C bond homolysis, thereby pointing to a key role for the conserved polar glutamate residue in controlling the initial generation of radical species.
机译:底物与鸟氨酸4,5-氨基变位酶(OAM)和甲基丙二酰-CoA变位酶(MCM)的结合导致保守的谷氨酸侧链与腺苷钴胺素(AdoCbl)辅因子的腺苷核糖之间形成静电相互作用。通过用谷氨酰胺,天门冬氨酸或丙氨酸代替残留物,评估该残留物(来自粘梭梭菌的OAM中的Glu338和人MCM中的Glu392)对AdoCbl Co-C键麦芽糖化和催化的贡献。 OAM变体E338Q,E338D和E338A的催化转化率分别降低了90倍,380倍和670倍,k_(cat)/ K_m降低了20倍,60倍和220倍。同样,MCM变体E392Q,E392D和E392A分别显示k_(cat)降低16倍,330倍和12倍。底物与OAM的结合不受单氨基酸突变的影响,因为停止流吸收光谱法表明OAM变体中外部亚胺的形成速率与天然酶相似。相反,催化水平的降低与受损的Co-C键断裂有关,因为紫外-可见光谱未显示在结合生理底物d-鸟氨酸后可检测到的AdoCbl均质。在MCM突变体中也未检测到AdoCbl均质化,因为它是天然酶。我们从这些结果得出结论,蛋白质和核糖之间的静电能逐渐减弱,导致Co-C键均质分解的激活能垒逐渐增加,从而指出了保守的谷氨酸残基在控制中的关键作用自由基物种的最初产生。

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