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Spike Sorting by Joint Probabilistic Modeling of Neural Spike Trains and Waveforms

机译:通过神经概率串和波形的联合概率建模对峰值进行排序

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This paper details a novel probabilistic method for automatic neural spike sorting which uses stochastic point process models of neural spike trains and parameterized action potential waveforms. A novel likelihood model for observed firing times as the aggregation of hidden neural spike trains is derived, as well as an iterative procedure for clustering the data and finding the parameters that maximize the likelihood. The method is executed and evaluated on both a fully labeled semiartificial dataset and a partially labeled real dataset of extracellular electric traces from rat hippocampus. In conditions of relatively high difficulty (i.e., with additive noise and with similar action potential waveform shapes for distinct neurons) the method achieves significant improvements in clustering performance over a baseline waveform-only Gaussian mixture model (GMM) clustering on the semiartificial set (1.98% reduction in error rate) and outperforms both the GMM and a state-of-the-art method on the real dataset (5.04% reduction in false positive + false negative errors). Finally, an empirical study of two free parameters for our method is performed on the semiartificial dataset.
机译:本文详细介绍了一种新的概率神经自动峰值分类方法,该方法使用了神经峰值序列的随机点过程模型和参数化的动作电位波形。推导了一个新的似然模型,用于观察隐藏的神经尖峰序列的聚集时的发射时间,以及用于对数据进行聚类并找到使似然性最大化的参数的迭代过程。该方法在来自大鼠海马的完全标记的半人工数据集和部分标记的真实细胞外电迹线实际数据集上执行和评估。在难度相对较高的情况下(即具有相加的噪声且不同神经元具有相似的动作电位波形),该方法相对于半人工集上仅基线波形的高斯混合模型(GMM)聚类(1.98)可以显着改善聚类性能错误率降低了%),并且在真实数据集上均优于GMM和最新方法(错误肯定+错误否定错误减少了5.04%)。最后,在半人工数据集上对我们的方法的两个自由参数进行了实证研究。

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