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MSTor version 2013: A new version of the computer code for the multi-structural torsional anharmonicity, now with a coupled torsional potential

机译:MSTor 2013版:用于多结构扭转非谐性的计算机代码的新版本,现在具有潜在的扭转潜力

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摘要

We present an improved version of the MSTor program package, which calculates partition functions and thermodynamic functions of complex molecules involving multiple torsions; the method is based on either a coupled torsional potential or an uncoupled torsional potential. The program can also carry out calculations in the multiple-structure local harmonic approximation. The program package also includes seven utility codes that can be used as stand-alone programs to calculate reduced moment of inertia matrices by the method of Kilpatrick and Pitzer, to generate conformational structures, to calculate, either analytically or by Monte Carlo sampling, volumes for torsional subdomains defined by Voronoi tessellation of the conformational subspace, to generate template input files for the MSTor calculation and Voronoi calculation, and to calculate one-dimensional torsional partition functions using the torsional eigenvalue summation method.
机译:我们提出了MSTor程序包的改进版本,该程序包可以计算涉及多个扭转的复杂分子的分配函数和热力学函数。该方法基于耦合扭转电势或非耦合扭转电势。该程序还可以在多结构局部谐波近似中执行计算。该程序包还包含七个实用程序代码,这些实用程序代码可以用作独立程序,以通过Kilpatrick和Pitzer的方法来计算惯性矩矩阵的简化,以生成构象结构,以解析方式或通过蒙特卡洛采样来计算由Voronoi细分构象子空间定义的扭转子域,以生成MSTor计算和Voronoi计算的模板输入文件,并使用扭转特征值求和方法计算一维扭转分区函数。

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