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首页> 外文期刊>Journal of proteome research >Venom Proteomics of Indonesian King Cobra, Ophiophagus hannah: Integrating Top-Down and Bottom-Up Approaches
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Venom Proteomics of Indonesian King Cobra, Ophiophagus hannah: Integrating Top-Down and Bottom-Up Approaches

机译:印度尼西亚眼镜王蛇眼镜蛇的毒液蛋白质组学:整合自上而下和自下而上的方法

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We report on the first application of top-down mass spectrometry in snake venomics. De novo sequence tags generated by, and ProSight Lite supported analysis of, combined collisional based dissotiations (CID and HCD) recorded in a hybrid LTQ Orbitrap instrument in data-dependent mode identified a number of proteins from different toxin families, namely, 11 three-finger toxins (7-7.9 kDa), a Kunitz-type inhibitor (6.3 kDa), ohanin (11.9 kDa), a novel phospholipase A(2) molecule (13.8 kDa), and the cysteine-rich secretory protein (CRISP) ophanin (25 kDa) from Indonesian king cobra venom. Complementary bottom-up MS/MS analyses contributed to the completion of a locus-resolved venom phenotypic map for Ophiophagus hannah, the world's longest venomous snake and a species of medical concern across its wide distribution range in forests from India to Southeast Asia. Its venom composition, comprising 32-35 proteins/peptides from 10 protein families, is dominated by alpha-neurotoxins and convincingly explains the main neurotoxic effects of human envenoming caused by king cobra bite. The integration of efficient chromatographic separation of the venom's components and locus-resolved toxin identification through top-down and bottom-up MS/MS-based species-specific database searching and de novo sequencing holds promise that the future will be bright for the field of venom research.
机译:我们报告了自上而下质谱在蛇形病毒学中的首次应用。由混合的LTQ Orbitrap仪器以数据依赖的方式记录的混合碰撞基散发(CID和HCD)生成的De Novo序列标签并支持ProSight Lite的分析,该序列标签识别出许多来自不同毒素家族的蛋白质,即11种手指毒素(7-7.9 kDa),Kunitz型抑制剂(6.3 kDa),ohanin(11.9 kDa),新型磷脂酶A(2)分子(13.8 kDa)和富含半胱氨酸的分泌蛋白(CRISP)ophanin( 25 kDa)来自印度尼西亚眼镜王蛇毒。互补的自下而上的MS / MS分析有助于完成Ophiophagus hannah(世界上最长的有毒蛇)的基因座解析毒液表型图,这是一种医学关注的物种,其分布范围广泛,从印度到东南亚。它的毒液成分包括来自10个蛋白质家族的32-35个蛋白质/肽,以α-神经毒素为主要成分,令人信服地解释了眼镜蛇王叮咬引起的人类毒液的主要神经毒性作用。通过基于自上而下和自下而上的基于MS / MS的物种特异性数据库搜索和从头测序,有效地分离毒液成分进行色谱分离并鉴定出可分辨的毒素,这为未来的发展提供了希望。毒液研究。

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