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Candidate gene analysis of selectin cluster in patients with multiple sclerosis.

机译:多发性硬化症患者中选择素簇的候选基因分析。

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摘要

Three single nucleotide polymorphisms (SNPs) with a potential impact on the function of selectins (rs6133, rs4987310 and rs5368 substitutions localized in the coding regions of P-sel, L-sel and E-sel, respectively) were analyzed in an Italian population of 165 patients with multiple sclerosis (MS) as compared with 149 controls and in a replication American population of Caucasian descent consisting of 122 patients and 50 controls. No significant differences in either allelic or genotypic frequency in all the SNPs tested were found in the Italian population. A tendency to an increased frequency of the rs6133 T allele was observed in the American population, but applying the Bonferroni correction the significance threshold was not reached. Haploview analysis demonstrated that rs4987310 and rs5368 markers are in strong LD (D' = 0.97) in both populations. Combining the two SNPs, we found no difference in haplotype distribution in patients compared with controls, either in Italian or in American population. Despite the fact that selectins play a role in the pathogenesis of MS and their encoding genes are located in regions associated with the disease, the selectin gene cluster studied likely does not influence the susceptibility to MS in Caucasians.
机译:分析了三个单核苷酸多态性(SNP),它们分别对选择素的功能产生潜在影响(分别位于P-sel,L-sel和E-sel编码区的rs6133,rs4987310和rs5368取代)。与149例对照相比,有165例多发性硬化症(MS)患者,在复制的美洲白种人后裔中,有122例患者和50例对照。在意大利人群中,所有测试的SNP的等位基因或基因型频率均无显着差异。在美国人群中观察到rs6133 T等位基因频率增加的趋势,但应用Bonferroni校正未达到显着性阈值。 Haploview分析表明,两种人群中rs4987310和rs5368标记均处于强LD(D'= 0.97)。结合这两个SNP,我们发现意大利或美国人群的患者单倍型分布与对照相比没有差异。尽管选择素在MS的发病机理中起作用,并且其编码基因位于与疾病相关的区域,但所研究的选择素基因簇很可能不会影响白种人对MS的易感性。

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