首页> 外文期刊>Journal of Molecular Biology >Mechanical Unfolding Intermediates Observed by Single-molecule Force Spectroscopy in a Fibronectin Type III Module.
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Mechanical Unfolding Intermediates Observed by Single-molecule Force Spectroscopy in a Fibronectin Type III Module.

机译:在纤连蛋白III型模块中通过单分子力光谱法观察到的机械展开中间体。

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Domain 10 of type III fibronectin ((10)FNIII) is known to play a pivotal role in the mechanical interactions between cell surface integrins and the extracellular matrix. Recent molecular dynamics simulations have predicted that (10)FNIII, when exposed to a stretching force, unfolds along two pathways, each with a distinct, mechanically stable intermediate. Here, we use single-molecule force spectroscopy combined with protein engineering to test these predictions by probing the mechanical unfolding pathway of (10)FNIII. Stretching single polyproteins containing the (10)FNIII module resulted in sawtooth patterns where (10)FNIII was seen unfolding in two consecutive steps. The native state unfolded at 100(+/-20)pN, elongating (10)FNIII by 12(+/-2)nm and reaching a clearly marked intermediate that unfolded at 50(+/-20)pN. Unfolding of the intermediate completed the elongation of the molecule by extending another 19(+/-2)nm. Site-directed mutageneses of residues in the A and B beta-strands (E9P and L19P) resulted in sawtooth patterns with all-or-none unfolding events that elongated the molecule by 19(+/-2)nm. In contrast, mutating residues in the G beta-strand gave results that were dependent on amino acid position. The mutation I88P in the middle of the G beta-strand resulted in native like unfolding sawtooth patterns showing an intact intermediate state. The mutation Y92P, which is near the end of G beta-strand, produced sawtooth patterns with all-or-none unfolding events that lengthened the molecule by 17(+/-2)nm. These results are consistent with the view that (10)FNIII can unfold in two different ways. Along one pathway, the detachment of the A and B beta-strands from the body of the folded module constitute the first unfolding event, followed by the unfolding of the remaining beta-sandwich structure. Along the second pathway, the detachment of the G beta-strands is involved in the first unfolding event. These results are in excellent agreement with the sequence of events predicted by molecular dynamics simulations of the (10)FNIII module.
机译:III型纤连蛋白((10)FNIII)的结构域10已知在细胞表面整合素与细胞外基质之间的机械相互作用中起关键作用。最近的分子动力学模拟预测,(10)FNIII在受到拉伸力作用时会沿着两条途径展开,每条途径都有一个独特的机械稳定的中间体。在这里,我们使用单分子力谱与蛋白质工程相结合,通过探测(10)FNIII的机械展开途径来测试这些预测。拉伸包含(10)FNIII模块的单个多蛋白会导致锯齿状,其中(10)FNIII在两个连续的步骤中会展开。天然状态以100(+/- 20)pN展开,将(10)FNIII延长12(+/- 2)nm,并达到清晰标记的中间体,以50(+/- 20)pN展开。中间体的展开通过延伸另一个19(+/- 2)nm完成了分子的延伸。 A和Bβ链(E9P和L19P)中残基的定点诱变产生锯齿状模式,具有全部或完全未发生的折叠事件,将分子延长了19(+/- 2)nm。相反,Gβ链中的突变残基给出的结果取决于氨基酸的位置。 Gβ链中间的突变I88P导致天然的未折叠锯齿状显示完整的中间状态。接近Gβ链末端的Y92P突变产生了带有全部或完全未折叠事件的锯齿状模式,从而使分子延长了17(+/- 2)nm。这些结果与(10)FNIII可以以两种不同方式展开的观点一致。沿着一个途径,A和Bβ链从折叠模块的主体上脱离是第一个展开事件,然后是其余β夹心结构的展开。沿着第二条路径,Gβ链的分离与第一个展开事件有关。这些结果与(10)FNIII模块的分子动力学模拟所预测的事件顺序非常吻合。

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