首页> 外文期刊>Journal of clinical virology: The official publication of the Pan American Society for Clinical Virology >Recent outbreak of aseptic meningitis in Italy due to Echovirus 30 and phylogenetic relationship with other European circulating strains
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Recent outbreak of aseptic meningitis in Italy due to Echovirus 30 and phylogenetic relationship with other European circulating strains

机译:最近因Echovirus 30在意大利爆发的无菌性脑膜炎,以及与其他欧洲传播株的系统发育关系

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Background: Enteroviruses (EVs) are common human viral pathogens, causing a variety of diseases, including aseptic meningitis. Recently, EV aseptic meningitis outbreaks have been reported across Europe, but, in Italy, knowledge of recent EV molecular epidemiology is very limited. Objectives: We report an outbreak of EV aseptic meningitis in 10 adults in North-Western Italy, from October to November 2012. Patients were parents or close relatives of children <5 years old attending the same class of a nursery school, suffering from a mild febrile upper respiratory disease. Phylogenetic relationship with other European circulating strains was analyzed updating E30 circulation in Italy in recent years. Study design: EVs were detected from cerebrospinal fluid (CSF) specimens with a real-time reverse transcription polymerase chain reaction and virus isolation was achieved from rectal and pharyngeal swabs. For cluster definition and phylogenetic studies, viral VP1 region was directly amplified and sequenced from CSF. Results: EVs were identified in CSF from all patients and from rectal and pharyngeal swabs in 7 of them. Direct sequencing of CSF revealed the presence of the same Echovirus 30 (E30) in all patients and phylogenetic analysis identified it as a diverging clade within E30 genotype VII, the most recent strain circulating in UK, Finland and Denmark since 2006. Conclusion: Molecular techniques allowed the rapid identification and typing of E30 from CSF. Phylogenetic analysis revealed that the cluster might be due to a new E30 variant within the genotype VII currently circulating in Europe, thus updating the epidemiology of EV circulation in Italy.
机译:背景:肠病毒(EVs)是人类常见的病毒病原体,引起多种疾病,包括无菌性脑膜炎。近来,欧洲已报道了EV无菌性脑膜炎的爆发,但是在意大利,对最近EV分子流行病学的了解非常有限。目标:我们报告了从2012年10月至2012年11月在意大利西北部发生的10名成年人爆发的EV无菌性脑膜炎的情况。患者为5岁以下的儿童的父母或近亲,他们在托儿所的同一班学习,患有轻度高热上呼吸道疾病。近年来,分析了与欧洲其他流行株的亲缘关系,以更新意大利的E30传播。研究设计:通过实时逆转录聚合酶链反应从脑脊液(CSF)标本中检测出EV,并从直肠和咽拭子中分离出病毒。为了进行聚类定义和系统发育研究,直接从CSF中扩增并测序了病毒VP1区。结果:所有患者以及其中7例直肠和咽拭子均在CSF中鉴定出EV。对脑脊液的直接测序揭示了所有患者中都存在相同的Echovirus 30(E30),并且系统发育分析确定其为E30基因型VII中的分支,这是自2006年以来在英国,芬兰和丹麦流通的最新菌株。结论:分子技术允许快速识别和键入CSF中的E30。系统发育分析表明,该集群可能是由于目前在欧洲流行的VII基因型中出现了新的E30变异,从而更新了意大利EV流行的流行病学。

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