首页> 外文期刊>Journal of clinical virology: The official publication of the Pan American Society for Clinical Virology >Usefulness of nested PCR and sequence analysis in a nosocomial outbreak of neonatal enterovirus infection.
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Usefulness of nested PCR and sequence analysis in a nosocomial outbreak of neonatal enterovirus infection.

机译:巢式PCR和序列分析在新生儿肠道病毒感染的医院内暴发中的有用性。

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BACKGROUND: Non-polio enterovirus infections are recognized in children during summer-fall seasons and they sometimes cause large outbreaks. We experienced a nosocomial infection in the neonatal nursery and echovirus type 7 was isolated from samples of four patients. OBJECTIVES: We diagnosed the horizontal infection of four neonates by reverse transcriptase-nested polymerase chain reaction (RT-nested PCR) and the nucleotide sequence. STUDY DESIGN: Total RNA was extracted from clinical isolates, serum samples and cerebrospinal fluid (CSF). We amplified enterovirus genome in the 5'-noncoding region by nested PCR and determined the nucleotide sequences. RESULTS: Enterovirus genome was detected in all isolates, in the acute-phase sera in all four patients and in the CSF in one patient by the first PCR. By using nested PCR, the genome was detected from convalescent-phase sera in two patients. All enterovirus genome obtained from the nursery outbreak showed the same sequences with 100% homology. CONCLUSION: We demonstrated the clinical advantages of RT-nested PCR from serum samples and the analysis of nucleotide sequencing gave the supportive evidence of identification of transmission pathway.
机译:背景:在夏季秋季儿童中发现了非脊髓灰质炎性肠病毒感染,有时会引起大面积暴发。我们在新生儿苗圃中发生了医院感染,并且从四名患者的样本中分离出了7型回声病毒。目的:我们通过逆转录-巢式聚合酶链反应(RT-巢式PCR)和核苷酸序列诊断了四名新生儿的水平感染。研究设计:从临床分离株,血清样本和脑脊液(CSF)中提取总RNA。我们通过巢式PCR扩增了5'-非编码区的肠道病毒基因组,并确定了核苷酸序列。结果:通过第一次PCR,在所有分离株中,在所有四名患者的急​​性期血清中以及在一名患者的CSF中均检测到了肠病毒基因组。通过使用巢式PCR,从两名患者的恢复期血清中检测到基因组。从苗圃暴发中获得的所有肠病毒基因组均显示具有100%同源性的相同序列。结论:我们证明了从血清样品中进行RT-巢式PCR的临床优势,核苷酸测序的分析为鉴定传播途径提供了支持性证据。

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