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首页> 外文期刊>Journal of chemical theory and computation: JCTC >Molecular Modeling of Triton X Micelles: Force Field Parameters, Self-Assembly, and Partition Equilibria
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Molecular Modeling of Triton X Micelles: Force Field Parameters, Self-Assembly, and Partition Equilibria

机译:Triton X胶束的分子建模:力场参数,自组装和分区平衡

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Nonionic surfactants of the Triton X-series find various applications in extraction processes and as solubilizing agents for the purification of membrane proteins. However, so far no optimized parameters are available to perform molecular simulations with a biomolecular force field. Therefore, we have determined the first optimized set of CHARMM parameters for the Triton X-series, enabling all-atom molecular dynamics (MD) simulations. In order to validate the new parameters, micellar sizes (aggregation numbers) of Triton X-114 and Triton X-100 have been investigated as a function of temperature and surfactant concentration. These results are comparable with experimental results. Furthermore, we have introduced a new algorithm to obtain micelle structures from self-assembly MD simulations for the COSMOmic method. This model allows efficient partition behavior predictions once a representative micelle structure is available. The predicted partition coefficients for the systems Triton X-114/water and Triton X-100/water are in excellent agreement with experimental results. Therefore, this method can be applied as a screening tool to find optimal solute-surfactant combinations or suitable surfactant systems for a specific application.
机译:Triton X系列的非离子表面活性剂在提取过程中有多种应用,并作为膜蛋白纯化的增溶剂。但是,到目前为止,尚无优化的参数可用于使用生物分子力场进行分子模拟。因此,我们为Triton X系列确定了第一套最优化的CHARMM参数,从而实现了全原子分子动力学(MD)模拟。为了验证新参数,已经研究了Triton X-114和Triton X-100的胶束尺寸(聚集数)随温度和表面活性剂浓度的变化。这些结果与实验结果相当。此外,我们引入了一种新算法,用于从COSMOmic方法的自组装MD模拟获得胶束结构。一旦具有代表性的胶束结构可用,该模型就可以进行有效的分区行为预测。 Triton X-114 /水和Triton X-100 /水系统的预测分配系数与实验结果非常吻合。因此,该方法可用作筛选工具,以找到最佳的溶质-表面活性剂组合或适合特定应用的表面活性剂体系。

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