...
首页> 外文期刊>Journal of chemical theory and computation: JCTC >Matching of Additive and Polarizable Force Fields for Multiscale Condensed Phase Simulations
【24h】

Matching of Additive and Polarizable Force Fields for Multiscale Condensed Phase Simulations

机译:多相凝聚相模拟的加性和极化力场匹配

获取原文
获取原文并翻译 | 示例
           

摘要

Inclusion of electronic polarization effects is one of the key aspects in which the accuracy of current biomolecular force fields may be improved. The principal drawback of such approaches is the computational cost, which typically ranges from 3 to 10 times that of the equivalent additive model, and may be greater for more sophisticated treatments of polarization or other many-body effects. Here, we present a multiscale approach that may be used to enhance the sampling in simulations with polarizable models, by using the additive model as a tool to explore configuration space. We use a method based on information theory to determine the charges for an additive model that has optimal overlap with the polarizable one, and we demonstrate the feasibility of enhancing sampling via a hybrid replica exchange scheme for several model systems. An additional advantage is that, in the process, we obtain a systematic method for deriving charges for an additive model that will be the natural complement to its polarizable parent. The additive charges are found by an effective coarse-graining of the polarizable force field, rather than by ad hoc procedures.
机译:包括电子极化效应是其中可以改善当前生物分子力场的准确性的关键方面之一。这种方法的主要缺点是计算成本,通常是等效加法模型的3到10倍,并且对于极化或其他多体效应的更复杂处理可能更大。在这里,我们提出了一种多尺度方法,该方法可以通过使用加性模型作为探索配置空间的工具来增强可极化模型仿真中的采样。我们使用一种基于信息论的方法来确定与极化模型具有最佳重叠的加性模型的电荷,并且我们证明了通过混合复制交换方案针对多个模型系统增强采样的可行性。另一个优点是,在此过程中,我们获得了一种系统的方法来推导加性模型的电荷,该加性模型将是其可极化父体的自然补充。附加电荷是通过可极化力场的有效粗粒度找到的,而不是通过临时程序找到的。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号