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Size-Consistent Multipartitioning QM/MM: A Stable and Efficient Adaptive QM/MM Method

机译:大小一致的多分区QM / MM:一种稳定高效的自适应QM / MM方法

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摘要

We propose a new adaptive QM/MM method, the size-consistent multi-partitioning (SCMP) QM/MM scheme, which enables stable and computationally efficient QM/MM simulations. A number of partitionings with identical size of the QM and the MM regions are considered with a new adaptive scheme in order to (1) realize smooth QM/MM switching, (2) introduce a conserved quantity (total energy, Hamiltonian), (3) avoid spurious artificial forces on the QM/MM border, and (4) allow for an efficient parallel implementation. Benchmark simulations performed for "QM water in MM water" show that energy conservation can be significantly improved and the computational efficiency allows treating also larger QM regions, for which previous methods had to face an intractable increase in computer time.
机译:我们提出了一种新的自适应QM / MM方法,即大小一致的多分区(SCMP)QM / MM方案,该方案可实现稳定且计算效率高的QM / MM仿真。通过一种新的自适应方案考虑了多个具有相同QM和MM区域大小的分区,以便(1)实现平滑的QM / MM切换,(2)引入守恒量(总能量,哈密顿量),(3 )避免在QM / MM边界上施加虚假的人为力量,并且(4)允许有效的并行实现。对“ MM水中的QM水”进行的基准模拟表明,可以显着改善节能效果,并且计算效率还可以处理较大的QM区域,而以前的方法必须面对这些问题,从而延长计算机时间。

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