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On the Equivalence of Schemes for Simulating Bilayers at Constant Surface Tension

机译:在恒定表面张力下模拟双层方案的等效性

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Lipid bilayers are simulated using flexible simulation cells in order to allow for relaxations in area per lipid as bilayer content and temperature are varied. We develop a suite of Monte Carlo (MC) moves designed to generate constant surface tension y and constant pressure P and find that the NPT partition function proposed by Attard [J. Chem. Phys. 1995,103, 9884—9885] leads to an NPyT partition function with a form invariant to choice of independent shape variables, We then compare this suite of MC moves to NPyT MC moves previously employed in our group as well as a pair of MC moves designed to replicate the NP_(||)P_⊥T "ensemble" often used in molecular dynamics simulations to yield zero surface tension and constant pressure. A detailed analysis of shape fluctuations in a small bilayer system reveals that the two latter MC move sets are different from one another as well as from our new suite of MC moves, as justified by careful analysis of the partition functions. However, the study of a larger bilayer system reveals that, for practical purposes for this system, all six MC move sets are comparable to one another.
机译:使用柔性模拟单元对脂质双层进行模拟,以便随着双层含量和温度的变化而使每个脂质的面积松弛。我们开发了一套旨在产生恒定表面张力y和恒定压力P的蒙特卡洛(MC)运动,并发现Attard提出的NPT分区函数[J.化学物理1995,103,9884—9885]导致了一个NPyT分区函数,该函数的形式对于选择独立形状变量来说是不变的,然后我们将这组MC移动与NPyT MC移动进行比较,该移动是我们小组先前使用的MC移动以及一对MC移动设计用于复制通常在分子动力学模拟中使用的NP_(||)P_⊥T“整体”以产生零表面张力和恒定压力。在小型双层系统中对形状波动进行的详细分析显示,后两个MC移动集与我们的新MC移动套件彼此不同,这是通过仔细分析分区函数来证明的。但是,对一个更大的双层系统的研究表明,出于该系统的实际目的,所有六个MC移动集都可以相互比较。

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