...
首页> 外文期刊>Journal of chemical theory and computation: JCTC >How to Convert SPME to P3M: Influence Functions and Error Estimates
【24h】

How to Convert SPME to P3M: Influence Functions and Error Estimates

机译:如何将SPME转换为P3M:影响函数和误差估计

获取原文
获取原文并翻译 | 示例
           

摘要

We demonstrate explicitly how the two seemingly different particle mesh Ewald methods, the smooth particle mesh Ewald (SPME) and the particle-particle particle mesh (P3M), can be mathematically transformed into each other. This allows us in particular to convert the error estimate of the P3M method in the energy-conserving scheme (also known as "P3M with analytic differentiation") into an error estimate for the SPME method, via a simple change of the lattice Green function. Our error estimate is valid for any values of the SPME parameters (mesh size, spline interpolation order, Ewald splitting parameter, real-space cutoff distance), including odd orders of splines. The problem with the self-forces is avoided thanks to an analytical formula that allows to subtract them directly within the particle mesh calculation. Plots of the accuracy of the SPME forces are provided for a wide range of parameter values. The main use of the error estimate is to allow a simulation program to scan quickly the multidimensional parameter space to find the best set of parameters to achieve a target accuracy at the smallest computational cost. As a byproduct, we show how a SPME code can be transformed into a P3M version by changing a few lines of code. We demonstrate also that the P3M lattice Green function can be approximated by a closed form expression, computable on-the-fly, that provides essentially the same accuracy as the full function.
机译:我们明确展示了两个看似不同的粒子网格Ewald方法,即光滑粒子网格Ewald(SPME)和粒子-粒子粒子网格(P3M),如何在数学上相互转换。这尤其使我们能够通过简单改变晶格格林函数将节能方案中的P3M方法的误差估计(也称为“具有解析微分的P3M”)转换为SPME方法的误差估计。我们的误差估计对SPME参数的任何值(网格大小,样条插值顺序,Ewald分裂参数,实际空间截止距离)均有效,包括样条的奇数阶。由于使用了一个可在粒子网格计算中直接减去它们的解析公式,因此避免了自力问题。针对各种参数值提供了SPME力的精度图。误差估计的主要用途是允许仿真程序快速扫描多维参数空间以找到最佳参数集,从而以最小的计算成本实现目标精度。作为副产品,我们展示了如何通过更改几行代码将SPME代码转换为P3M版本。我们还证明了P3M点阵Green函数可以由可即时计算的闭合形式表达式近似,该表达式可提供与整个函数基本相同的准确性。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号