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Detailed QM/MM study of the Electron Paramagnetic Resonance Parameters of Nitrosyl Myoglobin

机译:亚硝化肌红蛋白电子顺磁共振参数的详细QM / MM研究

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摘要

A number of popular density functionals are calibrated against high-resolution EPR data for low spin iron-nitrosyls present in nitric oxide bound myoglobin. The model incorporates both electrostatic and steric effects using a combined quantum mechanics/molecular mechanics (QM/MM) approach. Compared to the most recent experimental data, the calculated EPR parameters using GGA functionals are distinctly more accurate than those predicted by hybrid functionals. The latter is related to an erroneous spin distribution predicted with hybrid functionals in this particular case. However, owing to the inaccuracies in the prediction of spin state energetics, GGA functionals overestimate the binding energy of the nitric oxide ligand to the heme center. Using the calculated magnetic resonance parameters as well as the calculated rotational potential energy surface of the NO ligand over the heme plane, a possible geometric structure of elusive A-form if nitrosyl-myoglobin is proposed.
机译:针对高分辨率的EPR数据,针对一氧化氮结合的肌红蛋白中存在的低旋铁亚硝酰基,对许多流行的密度泛函进行了校准。该模型使用量子力学/分子力学(QM / MM)的组合方法结合了静电和空间效应。与最新的实验数据相比,使用GGA功能计算出的EPR参数比混合功能预测的精确得多。在这种特殊情况下,后者与使用混合功能预测的错误自旋分布有关。但是,由于对自旋态能量的预测不准确,GGA官能团高估了一氧化氮配体与血红素中心的结合能。使用计算出的磁共振参数以及计算出的血红素平面上NO配体的旋转势能面,提出了亚硝酰基肌红蛋白可能难以捉摸的A型几何结构。

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