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首页> 外文期刊>Journal of chemical theory and computation: JCTC >Definitive Benchmark Study of Ring Current Effects on Amide Proton Chemical Shifts
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Definitive Benchmark Study of Ring Current Effects on Amide Proton Chemical Shifts

机译:环电流对酰胺质子化学位移影响的确定性基准研究

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The ring current effect on chemical shifts of amide protons (Δδ_(RC)) is computed at the B3LYP/6-311++G(d,p)// B3LYP/aug-cc-pVTZ level of theory for 932 geometries of dimers of N-methylacetamide and aromatic amino acid side chains extracted from 21 different proteins. These Δδ_(RC) values are scaled by 1.074, based on MP2/cc-pVQZ//B3LYP/aug-cc-pVTZ chemical shift calculations on four representative formamide/benzene dimers, and are judged to be accurate to within 0.1 ppm based on CCSD(T)/CBS//B3LYP/aug-cc-pVTZ calculations on formamide. The 932 scaled Δδ_(RC) values are used to benchmark three empirical ring current models, including the Haigh-Mallion model used in the SPARTA, SHIFTX, and SHIFTS chemical shift prediction codes. Though the RMSDs for these three models are below 0.1 ppm, deviations up to 0.29 ppm are found, but these can be decreased to below0.1 ppm by changing a single parameter. The simple point-dipole model is found to perform just as well as the more complicated Haigh-Mallion and Johnson-Bovey models.
机译:环电流对酰胺质子化学位移(Δδ_(RC))的影响在B3LYP / 6-311 ++ G(d,p)// B3LYP / aug-cc-pVTZ理论水平上针对932个二聚体几何计算N-甲基乙酰胺和从21种不同蛋白质中提取的芳香族氨基酸侧链根据四个代表性的甲酰胺/苯二聚体的MP2 / cc-pVQZ // B3LYP / aug-cc-pVTZ化学位移计算,将这些Δδ_(RC)值按1.074进行缩放,并根据以下值确定为精确到0.1 ppm以内: CCSD(T)/ CBS // B3LYP / aug-cc-pVTZ对甲酰胺的计算。 932标度的Δδ_(RC)值用于对三个经验环电流模型进行基准测试,其中包括SPARTA,SHIFTX和SHIFTS化学位移预测代码中使用的Haigh-Mallion模型。尽管这三个模型的RMSD均低于0.1 ppm,但偏差高达0.29 ppm,但可以通过更改单个参数将其减小至0.1ppm以下。发现简单点偶极子模型的性能与更复杂的Haigh-Mallion和Johnson-Bovey模型一样。

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