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首页> 外文期刊>Journal of biological inorganic chemistry: JBIC: a publication of the Society of Biological Inorganic Chemistry >Anion-pi interactions in complexes of proteins and halogen-containing amino acids
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Anion-pi interactions in complexes of proteins and halogen-containing amino acids

机译:蛋白质与含卤素氨基酸复合物中的阴离子-π相互作用

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We analyzed the potential influence of anion-pi interactions on the stability of complexes of proteins and halogen-containing non-natural amino acids. Anion-pi interactions are distance and orientation dependent and our ab initio calculations showed that their energy can be lower than -8 kcal mol(-1), while most of their interaction energies lie in the range from -1 to -4 kcal mol(-1). About 20 % of these interactions were found to be repulsive. We have observed that Tyr has the highest occurrence among the aromatic residues involved in anion-pi interactions, while His made the least contribution. Furthermore, our study showed that 67 % of total interactions in the dataset are multiple anion-pi interactions. Most of the amino acid residues involved in anion-pi interactions tend to be buried in the solvent-excluded environment. The majority of the anion-pi interacting residues are located in regions with helical secondary structure. Analysis of stabilization centers for these complexes showed that all of the six residues capable of anion-pi interactions are important in locating one or more of such centers. We found that anion-pi interacting residues are sometimes involved in simultaneous interactions with halogens as well. With all that in mind, we can conclude that the anion-pi interactions can show significant influence on molecular organization and on the structural stability of the complexes of proteins and halogen-containing non-natural amino acids. Their influence should not be neglected in supramolecular chemistry and crystal engineering fields as well.
机译:我们分析了阴离子-pi相互作用对蛋白质和含卤素的非天然氨基酸复合物稳定性的潜在影响。阴离子-π相互作用是距离和方向的依赖,我们的从头算计算表明它们的能量可以低于-8 kcal mol(-1),而它们的大多数相互作用能都在-1至-4 kcal mol( -1)。这些相互作用中约有20%被排斥。我们已经观察到,在与阴离子-π相互作用涉及的芳族残基中,Tyr的发生率最高,而His的贡献最小。此外,我们的研究表明,数据集中67%的总相互作用是多种阴离子-pi相互作用。参与阴离子-π相互作用的大多数氨基酸残基往往被埋在溶剂排除的环境中。大部分阴离子-pi相互作用残基位于具有螺旋二级结构的区域。对这些络合物的稳定化中心的分析表明,能够进行阴离子-π相互作用的六个残基全部对确定一个或多个此类中心都很重要。我们发现,阴离子-pi相互作用残基有时也与卤素同时相互作用。考虑到所有这些,我们可以得出结论,阴离子-π相互作用可对分子组织以及蛋白质与含卤素的非天然氨基酸复合物的结构稳定性显示出显着影响。在超分子化学和晶体工程领域也不应忽略它们的影响。

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