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首页> 外文期刊>Diseases of Aquatic Organisms >Saprolegnia species in Norwegian salmon hatcheries: field survey identifies S-diclina sub-clade IIIB as the dominating taxon
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Saprolegnia species in Norwegian salmon hatcheries: field survey identifies S-diclina sub-clade IIIB as the dominating taxon

机译:挪威鲑鱼孵化场中的腐烂菌物种:现场调查确定,S-diclina次生IIIB类为主要分类群

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摘要

Saprolegnia isolates within the recognized clades encompassing the taxa S. parasitica and S. diclina act as opportunist and aggressive pathogens to both fish and their eggs. They are responsible for significant economic losses in aquaculture, particularly in salmonid hatcheries. However, the identity, distribution and pathogenic significance of involved species often remain unexplored. In this study, 89 Saprolegnia isolates were recovered from water, eggs and salmon tissue samples that originated from salmon (Salmo salar) hatcheries along the coast of Norway. The cultures were characterized morphologically and molecularly in order to provide an overview of the species composition of Saprolegnia spp. present in Norwegian salmon hatcheries. We demonstrate that S. diclina clearly dominated and contributed to 79% of the recovered isolates. Parsimony analyses of the nuclear ribosomal internal transcribed spacer (ITS) region split these isolates into 2 strongly supported sub-clades, S. diclina sub-clade IIIA and IIIB, where sub-clade IIIB accounted for 66% of all isolates. A minor portion of the isolates constituted other taxa that were either conspecific or showed strong affinity to S. parasitica, S. ferax, S. hypogyna and Scoliolegnia asterophora. The unique sub-clade IIIB of S. diclina was most prevalent in water and salmon eggs, while S. parasitica isolates were more frequently isolated from post hatching stages. The study demonstrated that morphological criteria in many cases were insufficient for species delimitation due to lack of sexual structures or incoherent morphological expression of such features within the tested replicates.
机译:公认的进化枝中的腐霉菌分离株包括寄生的S. parasitica和S. diclina,是鱼类及其卵的机会性和侵害性病原体。它们造成了水产养殖业的重大经济损失,特别是鲑鱼孵化场。但是,所涉物种的身份,分布和致病性往往仍待探索。在这项研究中,从挪威沿海鲑鱼孵化场的水,卵和鲑鱼组织样本中回收了89个腐臭菌分离物。对培养物进行形态学和分子学表征,以提供对腐腐菌属物种组成的概述。目前在挪威鲑鱼孵化场。我们证明S. diclina明显占优势,并贡献了79%的回收菌株。核糖核内转录间隔区(ITS)区域的简约分析将这些分离株分为2个强力支持的子分离株,狄氏链球菌子分离IIIA和IIIB,其中子分离IIIB占所有分离株的66%。分离株的一小部分构成其他同类或对寄生性链球菌,费拉氏链球菌,次生链球菌和星形胶虫的亲和力强的其他类群。在水和鲑鱼卵中,独枝链球菌独特的IIIB亚群最为普遍,而从孵化后阶段分离出的寄生链球菌则更为常见。该研究表明,在许多情况下,由于缺乏性结构或在测试的复制品中此类特征的形态表达不连贯,形态学标准不足以进行物种界定。

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