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Computational study of glycine-(water)(3) complex by density functional method

机译:甘氨酸-(水)(3)配合物的密度泛函计算研究

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Glycine-(water)(3) complexes have been studied by means of B3LYP density functional method using 6-311++G* basis set. In the complex considered here, the three water molecule are either attached to the carboxylic group or bridge between the amino group and carboxylic group of glycine. Four such complexes are studied. Relaxation energies, two-, three- and four-body interaction energies are obtained by applying many-body analysis to know their role in binding energy of the complex. The results are compared with recent work on glycine-(water)(3) complex with (-NH3+) group as proton donor [A. Chaudhari, P.K. Sahu, S.L. Lee, J. Chem. Phys. 120 (2004) 170]. In the most stable structure of glycine-(water)(3) complex, the three water molecules are attached to the carboxylic group of glycine and it is 5.3 kcal/mol lower in energy than that of the most stable structure reported earlier. The three-body term from water-water-water interaction in the most stable in this work and that reported earlier is unique since the distances between the water molecules are almost same. The two-body term from water-water interaction has significant contribution to the total two-body term when the distance between water molecules is less than 3 Angstrom. (C) 2004 Elsevier B.V. All rights reserved.
机译:甘氨酸-(水)(3)配合物已通过B3LYP密度泛函法使用6-311 ++ G *基集进行了研究。在此处考虑的络合物中,三个水分子要么连接至羧基,要么连接在甘氨酸的氨基和羧基之间。研究了四个这样的复合体。松弛能,二体,三体和四体相互作用能通过应用多体分析获得,了解它们在复合物结合能中的作用。将结果与最近关于甘氨酸-(水)(3)配合物(-NH3 +)作为质子供体的研究进行了比较[A.乔达里(P.K.)萨胡(S.L.)李,化学。物理120(2004)170]。在最稳定的甘氨酸-(水)(3)配合物结构中,三个水分子连接到甘氨酸的羧基上,其能量比先前报道的最稳定的结构低5.3 kcal / mol。在这项工作中最稳定的,由水-水-水相互作用产生的三体术语是独一无二的,因为水分子之间的距离几乎相同。当水分子之间的距离小于3埃时,水与水相互作用的两体项对总的两体项有很大贡献。 (C)2004 Elsevier B.V.保留所有权利。

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