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SCORPION2: a database for structure-function analysis of scorpion toxins

机译:SCORPION2:用于蝎毒结构功能分析的数据库

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摘要

Scorpion toxins are important experimental tools for characterization of vast array of ion channels and serve as scaffolds for drug design. General public database entries contain limited annotation whereby rich structure-function information from mutation studies is typically not available. SCORPION2 contains more than 800 records of native and mutant toxin sequences enriched with binding affinity and toxicity information, 624 three-dimensional structures and some 500 references. SCORPION2 has a set of search and prediction tools that allow users to extract and perform specific queries: text searches of scorpion toxin records, sequence similarity search, extraction of sequences, visualization of scorpion toxin structures, analysis of toxic activity, and functional annotation of previously uncharacterized scorpion toxins. The SCORPION2 database is available at http://sdmc.i2r.a-star.edu.sg/scorpion/.
机译:蝎毒素是表征大量离子通道的重要实验工具,可作为药物设计的支架。通用公共数据库条目包含有限的注释,因此通常无法获得来自突变研究的丰富结构功能信息。 SCORPION2包含800多个记录天然和突变毒素序列的记录,这些记录丰富了结合亲和力和毒性信息,624个三维结构和大约500个参考文献。 SCORPION2具有一组搜索和预测工具,使用户可以提取和执行特定查询:蝎子毒素记录的文本搜索,序列相似性搜索,序列提取,蝎子毒素结构的可视化,毒性活动分析以及以前的功能注释未表征的蝎子毒素。可在http://sdmc.i2r.a-star.edu.sg/scorpion/中找到SCORPION2数据库。

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