首页> 外文期刊>Chemical Physics: A Journal Devoted to Experimental and Theoretical Research Involving Problems of Both a Chemical and Physical Nature >An approach based on genetic algorithms and DFT for studying clusters: (H2O)(n) (2 <= n <= 13) cluster analysis
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An approach based on genetic algorithms and DFT for studying clusters: (H2O)(n) (2 <= n <= 13) cluster analysis

机译:一种基于遗传算法和DFT的聚类研究方法:(H2O)(n)(2 <= n <= 13)聚类分析

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The present work proposes the application of a genetic algorithm (GA) for determining global minima to be used as seeds for a higher level ab initio method analysis such as density function theory (DFT). Water clusters ((H2O)(n)(2 <= n <= 13)) are used as a test case and for the initial guesses four empirical potentials (TIP3P, TIP4P, TIP5P and ST2) were considered for the GA calculations. Two types of analysis were performed namely rigid (DFT_RM) and non rigid (DFT_NRM) molecules for the corresponding structures and energies. For the DFT analysis, the PBE exchange correlation functional and the large basis set A-PVTZ have been used. All structures and their respective energies calculated through the GA method, DFT_RM and DFT_NRM are compared and discussed. The proposed methodology showed to be very efficient in order to have quasi accurate global minima on the level of ab initio calculations and the data are discussed in the light of previously published results with particular attention to ((H2O)(n) (2 <= n <= 13)) clusters. The results suggest that the stabilization energy error for the empirical potentials used are additive with respect to the cluster size, roughly 0.5 kcal mol(-1) per water molecule after ZPE correction. Finally, the approach of using GA/empirical potential structures as starting point for ab initio optimization methods showed to be a computationally manageable strategy to explore the potential energy surface of large systems at quantum level. In conclusion, this work proposes an alternative approach to accurately study properties of larger systems in a very efficient manner. (c) 2005 Elsevier B.V. All rights reserved.
机译:本工作提出了一种遗传算法(GA)的应用,该算法用于确定全局最小值,以用作更高级别的从头算方法分析(例如密度函数理论(DFT))的种子。水团簇((H2O)(n)(2 <= n <= 13))被用作测试案例,对于初始猜测,考虑了四个经验电势(TIP3P,TIP4P,TIP5P和ST2)进行GA计算。对于相应的结构和能量,执行了两种类型的分析,即刚性(DFT_RM)和非刚性(DFT_NRM)分子。对于DFT分析,已使用PBE交换相关函数和大基集A-PVTZ。比较并讨论了通过GA方法计算的所有结构及其各自的能量DFT_RM和DFT_NRM。所提出的方法论是非常有效的,以便在从头计算的水平上具有准准确的全局最小值,并且根据先前发表的结果对数据进行了讨论,并特别注意((H2O)(n)(2 <= n <= 13))簇。结果表明,相对于簇的大小,所使用的经验势能的稳定能误差是相加的,ZPE校正后每个水分子大约为0.5 kcal mol(-1)。最后,使用遗传算法/经验势能结构作为从头开始优化方法的起点的方法显示出是一种可计算管理的策略,可以在量子水平上探索大型系统的势能面。总之,这项工作提出了一种替代方法,以一种非常有效的方式准确地研究大型系统的特性。 (c)2005 Elsevier B.V.保留所有权利。

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