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Identification of target genes of the transcription factor HNF1 beta and HNF1 alpha in a human embryonic kidney cell line

机译:鉴定人类胚胎肾细胞系中转录因子HNF1 beta和HNF1 alpha的靶基因

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Hepatocyte nuclear factor I beta (HNF1 beta, TCF2) is a tissue-specific transcription factor whose Mutation in humans leads to renal cysts, genital malfon-nations, pancreas atrophy and maturity onset diabetes of the Young (MODY5). Furthermore, HNF1 beta overexpression has been observed in clear cell cancer of the ovary. To identify potential HNF1 beta target genes whose activity may be deregulated in human patients, we established a human embryonic kidney cell line (HEK293) expressing HNF I conditionally. Using Fill recornbinase, we introduced wild type or mutated HNF1 beta at a defined chromosomal position allowing a most reproducible induction of the HNF1 beta derivatives upon tetracycline addition. By oligonucleotide microarrays we identified 25 HNF1 beta-regulatecl genes. By ail identical approach, we identified that the related transcription factor HNF1 alpha (TCF1) affects only nine genes in HEK293 cells and thus is a less efficient factor in these kidney cells. The HNF1 beta target genes dipeptidyl pepticiase 4 (DPP4), angiotensin converting enzyme 2 (ACE2) and osteopontin (SPP1) are most likely direct target genes, as they contain functional HNF1 binding sites in their promoter region. Since nine of the potential HNF1 beta target genes are deregulated in clear cell carcinoma of the ovary, we propose that HNF1 beta overexpression in the ovarian cancer participates in the altered expression pattern. (c) 2005 Elsevier B.V. All rights reserved.
机译:肝细胞核因子I beta(HNF1 beta,TCF2)是一种组织特异性转录因子,其在人类中的突变会导致肾囊肿,生殖器畸形,胰腺萎缩和年轻的成年糖尿病(MODY5)。此外,已在卵巢透明细胞癌中观察到HNF1β过表达。为了鉴定在人类患者中可能会失活的潜在HNF1β靶基因,我们建立了有条件表达HNF I的人类胚胎肾细胞系(HEK293)。使用Fill recornbinase,我们在定义的染色体位置上引入了野生型或突变的HNF1 beta,从而在四环素添加后诱导HNF1 beta衍生物的再现性最高。通过寡核苷酸微阵列,我们鉴定了25个HNF1β-regulatecl基因。通过完全相同的方法,我们确定了相关的转录因子HNF1 alpha(TCF1)仅影响HEK293细胞中的9个基因,因此在这些肾细胞中是效率较低的因子。 HNF1 beta靶基因二肽基胃蛋白酶4(DPP4),血管紧张素转化酶2(ACE2)和骨桥蛋白(SPP1)最可能是直接靶基因,因为它们在其启动子区域中含有功能性HNF1结合位点。由于九个潜在的HNF1 beta靶基因在卵巢透明细胞癌中被失调,因此我们建议卵巢癌中HNF1 beta的过表达参与改变的表达模式。 (c)2005 Elsevier B.V.保留所有权利。

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