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Expressed sequence tags from rhizomes of Glycyrrhiza uralensis

机译:甘草根茎表达序列标签

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摘要

Glycyrrhiza uralensis (Leguminosae, Fabaceae) is the most important medicinal plant used as a natural sweetener, in Chinese herbal medicines, and as a tobacco flavoring agent. Here, we report the generation of 56,857 expressed sequence tags (ESTs) derived from two full-length cDNA libraries produced from rhizomes (stolons) of two strains of G. uralensis, together with differential expression data obtained by Megasort super(TM) analysis. The Megasort super(TM) analysis was performed using two plant organs, namely, thickened roots and a rhizome-like organ, which differed in their glycyrrhizin content. After clustering of the 5'-end of ESTs, 5,542 contigs and 4,932 singletons were generated. A total of 10,474 nonredundant sequences were annotated on the basis of the TAIR database, of which 7,905 (75.5%) sequences exhibited homology to the sequences of registered genes. The gene functions of these 7,905 sequences were classified into Biological Process and Molecular Function on the basis of Gene Ontology (GO).
机译:甘草(豆科,豆科)是最重要的药用植物,用作天然甜味剂,中草药和烟草调味剂。在这里,我们报道了产生自两个全长cDNA文库的56,857个表达的序列标签(EST)的产生,该两个全长cDNA文库是从两个G. uralensis菌株的根茎(stolons)产生的,以及通过Megasort super(TM)分析获得的差异表达数据。使用两种植物器官,即增粗的根和根茎状器官进行了Megasort superTM分析,它们的甘草甜素含量不同。在EST的5'端聚类后,生成了5,542个重叠群和4,932个单例。在TAIR数据库的基础上,总共注释了10,474个非冗余序列,其中有7,905个(75.5%)序列与已注册基因的序列具有同源性。根据基因本体论(GO)将这7,905个序列的基因功能分为生物过程和分子功能。

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