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Theoretical modeling of open-shell molecules in solution: a QM/MM molecular dynamics approach

机译:开壳分子在溶液中的理论建模:QM / MM分子动力学方法

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摘要

In this work, the GLOB model, an effective and reliable computational approach well suited for ab initio and QM/MM molecular dynamics simulations of complex molecular systems in solution, has been applied to study two representative open-shell systems, the cobalt(II) ion and the glycine radical in aqueous solution, with special reference to their structural and magnetic properties. The main structural features of the solvent cage around the cobalt ion and the hydrogen bonding patterns around the neutral and zwitterionic forms of the glycine radical have been investigated in some detail. The general good agreement with experiments supports the use of the present model to investigate more challenging and biological/technological relevant open-shell systems.
机译:在这项工作中,GLOB模型是一种有效且可靠的计算方法,非常适合溶液中复杂分子系统的从头算和QM / MM分子动力学模拟,已用于研究两个代表性的开壳系统钴(II)水溶液中的离子和甘氨酸自由基,特别要注意它们的结构和磁性。已经详细研究了钴离子周围溶剂笼的主要结构特征以及甘氨酸自由基的中性和两性离子形式周围的氢键模式。与实验的总体良好协议支持使用本模型来研究更具挑战性且与生物/技术相关的开放式系统。

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  • 来源
    《Theoretical Chemistry Accounts》 |2008年第6期|499-506|共8页
  • 作者单位

    Dipartimento di Chimica and INSTM Università Federico II Complesso Monte S. Angelo Via Cintia 80126 Naples Italy;

    Dipartimento di Chimica and INSTM Università Federico II Complesso Monte S. Angelo Via Cintia 80126 Naples Italy;

    Dipartimento di Chimica and INSTM Università Federico II Complesso Monte S. Angelo Via Cintia 80126 Naples Italy;

    Dipartimento di Chimica and INSTM Università Federico II Complesso Monte S. Angelo Via Cintia 80126 Naples Italy;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Open-shell; Molecular dynamics; Continuum models; Cobalt; Glycine radical;

    机译:开壳;分子动力学;连续谱模型;钴;甘氨酸自由基;

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